Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN7Q9Y6W3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN7Q9Y6W3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN7Q9Y6W3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN7Q9Y6W3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CAPN7Q9Y6W3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.64■■□□□ 1.06
CAPN7Q9Y6W3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN7Q9Y6W3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 AL020996.1-203ENST00000536896 2307 ntBASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 AC133552.2-201ENST00000619106 1032 ntBASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.63■■□□□ 1.05
CAPN7Q9Y6W3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN7Q9Y6W3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 AC244015.2-201ENST00000616358 1861 ntBASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN7Q9Y6W3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms