Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.26■□□□□ 0.99
CSNK1G3Q9Y6M4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.26■□□□□ 0.99
CSNK1G3Q9Y6M4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G3Q9Y6M4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.26■□□□□ 0.99
CSNK1G3Q9Y6M4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 KRT18P11-201ENST00000435214 1283 ntBASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 RAP2CP1-201ENST00000605103 478 ntBASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.25■□□□□ 0.99
CSNK1G3Q9Y6M4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 AC009237.3-201ENST00000393279 1427 ntBASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 BID-214ENST00000617586 542 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 AC073111.5-205ENST00000641717 521 ntBASIC21.24■□□□□ 0.99
CSNK1G3Q9Y6M4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 CDCA4P2-201ENST00000441182 718 ntBASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1G3Q9Y6M4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G3Q9Y6M4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 AC026185.1-201ENST00000445748 174 ntBASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 AC005224.4-201ENST00000583262 1652 ntBASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 AC092068.2-201ENST00000590491 1708 ntBASIC21.21■□□□□ 0.99
CSNK1G3Q9Y6M4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1G3Q9Y6M4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 AC133561.1-201ENST00000568600 2415 ntBASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1G3Q9Y6M4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms