Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 AC012414.1-201ENST00000556676 535 ntBASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 MIR6821-201ENST00000617625 74 ntBASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A20Q9NP91 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A20Q9NP91 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 MIR6084-201ENST00000622012 110 ntBASIC20.83■□□□□ 0.93
SLC6A20Q9NP91 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A20Q9NP91 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
SLC6A20Q9NP91 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A20Q9NP91 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 AC097381.1-201ENST00000429019 1296 ntBASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A20Q9NP91 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 GUSBP5-202ENST00000510805 1989 ntBASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.81■□□□□ 0.92
SLC6A20Q9NP91 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 OR7E47P-201ENST00000546390 1422 ntBASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 AC087623.3-201ENST00000607047 1098 ntBASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 AL354811.1-201ENST00000610286 706 ntBASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 AC092666.2-201ENST00000613287 246 ntBASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 AL358852.1-201ENST00000623174 1268 ntBASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A20Q9NP91 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC6A20Q9NP91 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms