Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AC026185.1-201ENST00000445748 174 ntBASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SH3TC1Q8TE82 ESRRAP2-201ENST00000418437 1549 ntBASIC27.2■■□□□ 1.94
SH3TC1Q8TE82 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.2■■□□□ 1.94
SH3TC1Q8TE82 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SH3TC1Q8TE82 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.18■■□□□ 1.94
SH3TC1Q8TE82 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 KRT18P11-201ENST00000435214 1283 ntBASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 KRT87P-202ENST00000534226 1464 ntBASIC27.17■■□□□ 1.94
SH3TC1Q8TE82 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.16■■□□□ 1.94
SH3TC1Q8TE82 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 LINC01960-201ENST00000563759 1884 ntBASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 AC011767.1-201ENST00000617410 1153 ntBASIC27.15■■□□□ 1.94
SH3TC1Q8TE82 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.14■■□□□ 1.94
SH3TC1Q8TE82 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SH3TC1Q8TE82 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SH3TC1Q8TE82 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.14■■□□□ 1.93
SH3TC1Q8TE82 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 CROCCP5-201ENST00000436658 830 ntBASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 AC104187.1-201ENST00000607510 612 ntBASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SH3TC1Q8TE82 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.12■■□□□ 1.93
SH3TC1Q8TE82 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 AC079089.2-201ENST00000531211 1277 ntBASIC27.11■■□□□ 1.93
SH3TC1Q8TE82 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms