Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDZD8Q8NEN9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 AC079089.2-201ENST00000531211 1277 ntBASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDZD8Q8NEN9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PDZD8Q8NEN9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.7■■□□□ 1.22
PDZD8Q8NEN9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.69■■□□□ 1.22
PDZD8Q8NEN9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 NTF6G-201ENST00000591094 616 ntBASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PDZD8Q8NEN9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.67■■□□□ 1.22
PDZD8Q8NEN9 AC009237.3-201ENST00000393279 1427 ntBASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.66■■□□□ 1.22
PDZD8Q8NEN9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.65■■□□□ 1.22
PDZD8Q8NEN9 DUSP8P5-201ENST00000422884 1815 ntBASIC22.64■■□□□ 1.22
PDZD8Q8NEN9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PDZD8Q8NEN9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.64■■□□□ 1.22
PDZD8Q8NEN9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 AC022517.1-201ENST00000592429 346 ntBASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PDZD8Q8NEN9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms