Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 TSPY6P-201ENST00000448518 926 ntBASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 DUX4L16-201ENST00000555130 1264 ntBASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 AC231657.2-201ENST00000624556 255 ntBASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 AC007322.1-201ENST00000426983 750 ntBASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 UBE2DNL-204ENST00000602536 740 ntBASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEFF1Q8IYR6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 AC005181.1-201ENST00000604782 1256 ntBASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEFF1Q8IYR6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 AC009237.3-201ENST00000393279 1427 ntBASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEFF1Q8IYR6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 AL138781.1-201ENST00000566567 1274 ntBASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 DUSP8P3-201ENST00000399571 1760 ntBASIC21.59■■□□□ 1.05
TMEFF1Q8IYR6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 AC093323.1-202ENST00000635031 2045 ntBASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 KRT18P6-201ENST00000555540 1265 ntBASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEFF1Q8IYR6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEFF1Q8IYR6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEFF1Q8IYR6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEFF1Q8IYR6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TMEFF1Q8IYR6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 GUSBP6-202ENST00000438529 1198 ntBASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms