Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNAP47Q5SQN1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 AC092437.1-201ENST00000624794 1048 ntBASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SNAP47Q5SQN1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNAP47Q5SQN1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNAP47Q5SQN1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.02■□□□□ 0.95
SNAP47Q5SQN1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 AC090192.1-201ENST00000517740 490 ntBASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 RARRES2P11-201ENST00000635158 484 ntBASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.01■□□□□ 0.95
SNAP47Q5SQN1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SNAP47Q5SQN1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21■□□□□ 0.95
SNAP47Q5SQN1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAP47Q5SQN1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAP47Q5SQN1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNAP47Q5SQN1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNAP47Q5SQN1 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNAP47Q5SQN1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 SMUG1P1-201ENST00000590640 811 ntBASIC20.98■□□□□ 0.95
SNAP47Q5SQN1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNAP47Q5SQN1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms