Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 AC087239.1-201ENST00000622671 572 ntBASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.47■□□□□ 0.39
VMA21Q3ZAQ7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 SYT6-210ENST00000641643 1587 ntBASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 OR2I1P-207ENST00000453522 948 ntBASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 AL031602.1-201ENST00000633169 911 ntBASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.46■□□□□ 0.39
VMA21Q3ZAQ7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VMA21Q3ZAQ7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 AL138724.1-201ENST00000606771 1088 ntBASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VMA21Q3ZAQ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms