Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PMS1P54277 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.92■■□□□ 1.42
PMS1P54277 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.92■■□□□ 1.42
PMS1P54277 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PMS1P54277 OR2I1P-207ENST00000453522 948 ntBASIC23.92■■□□□ 1.42
PMS1P54277 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.92■■□□□ 1.42
PMS1P54277 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PMS1P54277 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.92■■□□□ 1.42
PMS1P54277 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.92■■□□□ 1.42
PMS1P54277 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PMS1P54277 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PMS1P54277 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PMS1P54277 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PMS1P54277 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PMS1P54277 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.91■■□□□ 1.42
PMS1P54277 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PMS1P54277 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PMS1P54277 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PMS1P54277 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PMS1P54277 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PMS1P54277 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PMS1P54277 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.9■■□□□ 1.42
PMS1P54277 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PMS1P54277 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PMS1P54277 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PMS1P54277 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.9■■□□□ 1.42
PMS1P54277 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PMS1P54277 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PMS1P54277 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PMS1P54277 AC079089.2-201ENST00000531211 1277 ntBASIC23.89■■□□□ 1.41
PMS1P54277 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.89■■□□□ 1.41
PMS1P54277 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.89■■□□□ 1.41
PMS1P54277 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PMS1P54277 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PMS1P54277 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.89■■□□□ 1.41
PMS1P54277 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PMS1P54277 AC026471.6-201ENST00000622954 1905 ntBASIC23.88■■□□□ 1.41
PMS1P54277 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.88■■□□□ 1.41
PMS1P54277 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.88■■□□□ 1.41
PMS1P54277 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.88■■□□□ 1.41
PMS1P54277 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.88■■□□□ 1.41
PMS1P54277 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
PMS1P54277 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PMS1P54277 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PMS1P54277 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.88■■□□□ 1.41
PMS1P54277 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PMS1P54277 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 AC026310.3-201ENST00000625186 2373 ntBASIC23.87■■□□□ 1.41
PMS1P54277 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.87■■□□□ 1.41
PMS1P54277 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 AC092171.4-201ENST00000609130 632 ntBASIC23.87■■□□□ 1.41
PMS1P54277 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.87■■□□□ 1.41
PMS1P54277 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PMS1P54277 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS1P54277 SYT6-210ENST00000641643 1587 ntBASIC23.86■■□□□ 1.41
PMS1P54277 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PMS1P54277 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.86■■□□□ 1.41
PMS1P54277 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.86■■□□□ 1.41
PMS1P54277 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PMS1P54277 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS1P54277 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.86■■□□□ 1.41
PMS1P54277 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PMS1P54277 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PMS1P54277 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.85■■□□□ 1.41
PMS1P54277 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PMS1P54277 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.85■■□□□ 1.41
PMS1P54277 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.85■■□□□ 1.41
PMS1P54277 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.85■■□□□ 1.41
PMS1P54277 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS1P54277 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms