Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.08□□□□□ -0.15
LINC00474Q9P2X8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 AC006455.2-201ENST00000429931 906 ntBASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 OR2I1P-207ENST00000453522 948 ntBASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 AC133561.4-201ENST00000566112 224 ntBASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 AL136162.1-201ENST00000607711 1078 ntBASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 AC004687.1-201ENST00000579003 1625 ntBASIC14.08□□□□□ -0.16
LINC00474Q9P2X8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00474Q9P2X8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 EDA-201ENST00000338901 1233 ntBASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 AC096631.2-201ENST00000436136 790 ntBASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 AC106739.1-201ENST00000617035 715 ntBASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00474Q9P2X8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PBX2P1-201ENST00000493219 1291 ntBASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 AL139246.5-201ENST00000606645 996 ntBASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 ESRRAP2-201ENST00000418437 1549 ntBASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LINC00474Q9P2X8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms