Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NANOGQ9H9S0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NANOGQ9H9S0 AC021242.3-201ENST00000607598 1377 ntBASIC20.6■□□□□ 0.89
NANOGQ9H9S0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
NANOGQ9H9S0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NANOGQ9H9S0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 AC009102.2-201ENST00000606772 1639 ntBASIC20.58■□□□□ 0.89
NANOGQ9H9S0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.58■□□□□ 0.89
NANOGQ9H9S0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NANOGQ9H9S0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NANOGQ9H9S0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NANOGQ9H9S0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NANOGQ9H9S0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 AL031848.2-201ENST00000607670 837 ntBASIC20.57■□□□□ 0.88
NANOGQ9H9S0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
NANOGQ9H9S0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.56■□□□□ 0.88
NANOGQ9H9S0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NANOGQ9H9S0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 Z98882.1-201ENST00000622160 2253 ntBASIC20.55■□□□□ 0.88
NANOGQ9H9S0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NANOGQ9H9S0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms