Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 AC092068.2-201ENST00000590491 1708 ntBASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
SH3TC1Q8TE82 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 CDCA4P2-201ENST00000441182 718 ntBASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 AC079140.4-201ENST00000507448 529 ntBASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 AC073111.5-205ENST00000641717 521 ntBASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.29■■□□□ 1.96
SH3TC1Q8TE82 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.28■■□□□ 1.96
SH3TC1Q8TE82 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.27■■□□□ 1.96
SH3TC1Q8TE82 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
SH3TC1Q8TE82 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.27■■□□□ 1.96
SH3TC1Q8TE82 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.27■■□□□ 1.96
SH3TC1Q8TE82 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.26■■□□□ 1.96
SH3TC1Q8TE82 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
SH3TC1Q8TE82 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 BID-214ENST00000617586 542 ntTSL 5 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SH3TC1Q8TE82 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.25■■□□□ 1.95
SH3TC1Q8TE82 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.25■■□□□ 1.95
SH3TC1Q8TE82 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.25■■□□□ 1.95
SH3TC1Q8TE82 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SH3TC1Q8TE82 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 HLA-L-209ENST00000420110 1011 ntBASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SH3TC1Q8TE82 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 AC005224.4-201ENST00000583262 1652 ntBASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SH3TC1Q8TE82 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SH3TC1Q8TE82 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 AC009237.3-201ENST00000393279 1427 ntBASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SH3TC1Q8TE82 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SH3TC1Q8TE82 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms