Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YPR078CYPR078C 1119 nt5.62□□□□□ -1.51
MSH4P40965 RRG8YPR116W 834 nt5.62□□□□□ -1.51
MSH4P40965 TDA6YPR157W 1404 nt5.62□□□□□ -1.51
MSH4P40965 RSC6YCR052W 1452 nt5.62□□□□□ -1.51
MSH4P40965 SOF1YLL011W 1470 nt5.62□□□□□ -1.51
MSH4P40965 YAP1802YGR241C 1707 nt5.62□□□□□ -1.51
MSH4P40965 FAA3YIL009W 2085 nt5.62□□□□□ -1.51
MSH4P40965 YCR085WYCR085W 354 nt5.61□□□□□ -1.51
MSH4P40965 RTR1YER139C 681 nt5.61□□□□□ -1.51
MSH4P40965 THI5YFL058W 1023 nt5.61□□□□□ -1.51
MSH4P40965 TYS1YGR185C 1185 nt5.61□□□□□ -1.51
MSH4P40965 ADE3YGR204W 2841 nt5.61□□□□□ -1.51
MSH4P40965 VMA22YHR060W 546 nt5.61□□□□□ -1.51
MSH4P40965 BRE2YLR015W 1518 nt5.61□□□□□ -1.51
MSH4P40965 FRS1YLR060W 1788 nt5.61□□□□□ -1.51
MSH4P40965 YMR158C-AYMR158C-A 138 nt5.61□□□□□ -1.51
MSH4P40965 ALD3YMR169C 1521 nt5.61□□□□□ -1.51
MSH4P40965 ALD2YMR170C 1521 nt5.61□□□□□ -1.51
MSH4P40965 THI12YNL332W 1023 nt5.61□□□□□ -1.51
MSH4P40965 SPC29YPL124W 762 nt5.61□□□□□ -1.51
MSH4P40965 FDH2YPL275W 711 nt5.61□□□□□ -1.51
MSH4P40965 RTK1YDL025C 1863 nt5.6□□□□□ -1.51
MSH4P40965 URK1YNR012W 1506 nt5.6□□□□□ -1.51
MSH4P40965 HRR25YPL204W 1485 nt5.6□□□□□ -1.51
MSH4P40965 RGL1YPL066W 1440 nt5.6□□□□□ -1.51
MSH4P40965 YDR210W-AYDR210W-A 1317 nt5.6□□□□□ -1.51
MSH4P40965 YGL082WYGL082W 1146 nt5.6□□□□□ -1.51
MSH4P40965 YGL204CYGL204C 306 nt5.6□□□□□ -1.51
MSH4P40965 COX18YGR062C 951 nt5.6□□□□□ -1.51
MSH4P40965 APS1YLR170C 471 nt5.6□□□□□ -1.51
MSH4P40965 SHE1YBL031W 1017 nt5.6□□□□□ -1.51
MSH4P40965 MRP21YBL090W 534 nt5.6□□□□□ -1.51
MSH4P40965 IZH2YOL002C 954 nt5.6□□□□□ -1.51
MSH4P40965 YOR1YGR281W 4434 nt5.6□□□□□ -1.51
MSH4P40965 UGA2YBR006W 1494 nt5.59□□□□□ -1.51
MSH4P40965 DOA1YKL213C 2148 nt5.59□□□□□ -1.51
MSH4P40965 RPL34AYER056C-A 366 nt5.59□□□□□ -1.51
MSH4P40965 TYW3YGL050W 822 nt5.59□□□□□ -1.51
MSH4P40965 HIS6YIL020C 786 nt5.59□□□□□ -1.51
MSH4P40965 MMF1YIL051C 438 nt5.59□□□□□ -1.51
MSH4P40965 YLR125WYLR125W 411 nt5.59□□□□□ -1.51
MSH4P40965 GLT1YDL171C 6438 nt5.59□□□□□ -1.52
MSH4P40965 GDB1YPR184W 4611 nt5.58□□□□□ -1.52
MSH4P40965 YHR202WYHR202W 1809 nt5.58□□□□□ -1.52
MSH4P40965 RPL24AYGL031C 468 nt5.58□□□□□ -1.52
MSH4P40965 RPL28YGL103W 450 nt5.58□□□□□ -1.52
MSH4P40965 YML057C-AYML057C-A 390 nt5.58□□□□□ -1.52
MSH4P40965 ARF3YOR094W 552 nt5.58□□□□□ -1.52
MSH4P40965 PEP4YPL154C 1218 nt5.58□□□□□ -1.52
MSH4P40965 YPL205CYPL205C 345 nt5.58□□□□□ -1.52
MSH4P40965 SAF1YBR280C 1914 nt5.58□□□□□ -1.52
MSH4P40965 MGS1YNL218W 1764 nt5.57□□□□□ -1.52
MSH4P40965 MEF2YJL102W 2460 nt5.57□□□□□ -1.52
MSH4P40965 EAR1YMR171C 1653 nt5.57□□□□□ -1.52
MSH4P40965 LEU1YGL009C 2340 nt5.57□□□□□ -1.52
MSH4P40965 YJL206CYJL206C 2277 nt5.57□□□□□ -1.52
MSH4P40965 AAD4YDL243C 990 nt5.57□□□□□ -1.52
MSH4P40965 OST5YGL226C-A 261 nt5.57□□□□□ -1.52
MSH4P40965 THI11YJR156C 1023 nt5.57□□□□□ -1.52
MSH4P40965 SDH3YKL141W 597 nt5.57□□□□□ -1.52
MSH4P40965 MRPL17YNL252C 846 nt5.57□□□□□ -1.52
MSH4P40965 CYC2YOR037W 1101 nt5.57□□□□□ -1.52
MSH4P40965 SSA2YLL024C 1920 nt5.56□□□□□ -1.52
MSH4P40965 SUL2YLR092W 2682 nt5.56□□□□□ -1.52
MSH4P40965 FAP1YNL023C 2898 nt5.56□□□□□ -1.52
MSH4P40965 YER084W-AYER084W-A 513 nt5.56□□□□□ -1.52
MSH4P40965 MDG1YNL173C 1101 nt5.56□□□□□ -1.52
MSH4P40965 YOR105WYOR105W 327 nt5.56□□□□□ -1.52
MSH4P40965 MMT2YPL224C 1455 nt5.56□□□□□ -1.52
MSH4P40965 ENT1YDL161W 1365 nt5.55□□□□□ -1.52
MSH4P40965 PDR10YOR328W 4695 nt5.55□□□□□ -1.52
MSH4P40965 BUD7YOR299W 2241 nt5.55□□□□□ -1.52
MSH4P40965 RIM15YFL033C 5313 nt5.55□□□□□ -1.52
MSH4P40965 VPS38YLR360W 1320 nt5.55□□□□□ -1.52
MSH4P40965 HOT1YMR172W 2160 nt5.55□□□□□ -1.52
MSH4P40965 YCR050CYCR050C 309 nt5.55□□□□□ -1.52
MSH4P40965 TAD1YGL243W 1203 nt5.55□□□□□ -1.52
MSH4P40965 YGR064WYGR064W 369 nt5.55□□□□□ -1.52
MSH4P40965 YJL147CYJL147C 1149 nt5.55□□□□□ -1.52
MSH4P40965 YKL115CYKL115C 393 nt5.55□□□□□ -1.52
MSH4P40965 YBR056W-AYBR056W-A 201 nt5.55□□□□□ -1.52
MSH4P40965 PEX29YDR479C 1665 nt5.55□□□□□ -1.52
MSH4P40965 AVT2YEL064C 1443 nt5.55□□□□□ -1.52
MSH4P40965 YIG1YPL201C 1386 nt5.55□□□□□ -1.52
MSH4P40965 TDA11YHR159W 1515 nt5.54□□□□□ -1.52
MSH4P40965 NOP58YOR310C 1536 nt5.54□□□□□ -1.52
MSH4P40965 RPN6YDL097C 1305 nt5.54□□□□□ -1.52
MSH4P40965 TUB3YML124C 1338 nt5.54□□□□□ -1.52
MSH4P40965 HIS4YCL030C 2400 nt5.54□□□□□ -1.52
MSH4P40965 CNN1YFR046C 1086 nt5.54□□□□□ -1.52
MSH4P40965 YGR126WYGR126W 693 nt5.54□□□□□ -1.52
MSH4P40965 YGR293CYGR293C 462 nt5.54□□□□□ -1.52
MSH4P40965 YHL049CYHL049C 816 nt5.54□□□□□ -1.52
MSH4P40965 PCL7YIL050W 858 nt5.54□□□□□ -1.52
MSH4P40965 YKL162CYKL162C 1209 nt5.54□□□□□ -1.52
MSH4P40965 RPC34YNR003C 954 nt5.54□□□□□ -1.52
MSH4P40965 MET31YPL038W 534 nt5.54□□□□□ -1.52
MSH4P40965 YBR300CYBR300C 498 nt5.54□□□□□ -1.52
MSH4P40965 HXT14YNL318C 1623 nt5.54□□□□□ -1.52
MSH4P40965 IOC4YMR044W 1428 nt5.54□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 61 ms