Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56-RWDD3S4R434 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56-RWDD3S4R434 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TMEM56-RWDD3S4R434 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TMEM56-RWDD3S4R434 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TMEM56-RWDD3S4R434 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 BHLHE23-202ENST00000612929 1109 ntBASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 PVT1_1.1-201ENST00000615125 194 ntBASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMEM56-RWDD3S4R434 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TMEM56-RWDD3S4R434 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM56-RWDD3S4R434 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM56-RWDD3S4R434 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM56-RWDD3S4R434 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 Z98882.1-201ENST00000622160 2253 ntBASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 AC005703.6-201ENST00000623265 1329 ntBASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM56-RWDD3S4R434 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TMEM56-RWDD3S4R434 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms