Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
CAPN7Q9Y6W3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN7Q9Y6W3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN7Q9Y6W3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN7Q9Y6W3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CAPN7Q9Y6W3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CAPN7Q9Y6W3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CAPN7Q9Y6W3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 AL592295.1-201ENST00000400984 884 ntBASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN7Q9Y6W3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 RPS2P7-201ENST00000447334 885 ntBASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CAPN7Q9Y6W3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CAPN7Q9Y6W3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CAPN7Q9Y6W3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CAPN7Q9Y6W3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms