Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 AC142086.2-201ENST00000569753 217 ntBASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 AC104187.1-201ENST00000607510 612 ntBASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 KRT87P-202ENST00000534226 1464 ntBASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 AC231657.2-201ENST00000624556 255 ntBASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD4Q5XG99 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 AC083906.2-201ENST00000511578 360 ntBASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.61■■□□□ 1.05
LYSMD4Q5XG99 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 AL050303.2-201ENST00000619798 666 ntBASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 AC005224.4-201ENST00000583262 1652 ntBASIC21.6■■□□□ 1.05
LYSMD4Q5XG99 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 AC007322.1-201ENST00000426983 750 ntBASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 TSPY6P-201ENST00000448518 926 ntBASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD4Q5XG99 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 AC009237.3-201ENST00000393279 1427 ntBASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 TSPY20P-201ENST00000450910 630 ntBASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 AC005181.1-201ENST00000604782 1256 ntBASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD4Q5XG99 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD4Q5XG99 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD4Q5XG99 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD4Q5XG99 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 DUX4L16-201ENST00000555130 1264 ntBASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 UBE2DNL-204ENST00000602536 740 ntBASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD4Q5XG99 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 SLC29A4P1-201ENST00000398760 971 ntBASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 KRT18P6-201ENST00000555540 1265 ntBASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD4Q5XG99 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms