Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A2P43004 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A2P43004 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC1A2P43004 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SLC1A2P43004 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A2P43004 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.79■■□□□ 1.08
SLC1A2P43004 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC1A2P43004 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC1A2P43004 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 SRD5A1P1-201ENST00000442297 786 ntBASIC21.79■■□□□ 1.08
SLC1A2P43004 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.79■■□□□ 1.08
SLC1A2P43004 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC1A2P43004 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC1A2P43004 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC1A2P43004 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A2P43004 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC1A2P43004 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC1A2P43004 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A2P43004 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC1A2P43004 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC1A2P43004 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A2P43004 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A2P43004 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SLC1A2P43004 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A2P43004 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC1A2P43004 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC1A2P43004 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC1A2P43004 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.77■■□□□ 1.08
SLC1A2P43004 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC1A2P43004 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC1A2P43004 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A2P43004 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC1A2P43004 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A2P43004 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC1A2P43004 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A2P43004 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC1A2P43004 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A2P43004 MIR3181-201ENST00000578512 73 ntBASIC21.76■■□□□ 1.07
SLC1A2P43004 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC1A2P43004 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC1A2P43004 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SLC1A2P43004 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A2P43004 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A2P43004 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC1A2P43004 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 MIR4466-201ENST00000606121 54 ntBASIC21.75■■□□□ 1.07
SLC1A2P43004 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SLC1A2P43004 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC1A2P43004 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A2P43004 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SLC1A2P43004 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC1A2P43004 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SLC1A2P43004 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.74■■□□□ 1.07
SLC1A2P43004 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.74■■□□□ 1.07
SLC1A2P43004 AL031602.1-201ENST00000633169 911 ntBASIC21.74■■□□□ 1.07
SLC1A2P43004 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC1A2P43004 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A2P43004 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SLC1A2P43004 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A2P43004 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A2P43004 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A2P43004 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SLC1A2P43004 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC1A2P43004 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC1A2P43004 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC1A2P43004 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC1A2P43004 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC1A2P43004 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A2P43004 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC1A2P43004 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms