Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CTSDP07339 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTSDP07339 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSDP07339 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSDP07339 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSDP07339 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTSDP07339 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTSDP07339 KRT18P60-201ENST00000312876 1297 ntBASIC18.09■□□□□ 0.49
CTSDP07339 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSDP07339 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSDP07339 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSDP07339 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSDP07339 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSDP07339 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSDP07339 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSDP07339 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTSDP07339 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTSDP07339 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CTSDP07339 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
CTSDP07339 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CTSDP07339 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSDP07339 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTSDP07339 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.07■□□□□ 0.48
CTSDP07339 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.07■□□□□ 0.48
CTSDP07339 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 CA15P2-201ENST00000611168 834 ntBASIC18.07■□□□□ 0.48
CTSDP07339 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CTSDP07339 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSDP07339 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSDP07339 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 SNX5-217ENST00000606557 1087 ntBASIC18.06■□□□□ 0.48
CTSDP07339 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.06■□□□□ 0.48
CTSDP07339 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSDP07339 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSDP07339 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSDP07339 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSDP07339 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSDP07339 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSDP07339 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CTSDP07339 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.05■□□□□ 0.48
CTSDP07339 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CTSDP07339 AC073130.3-201ENST00000624389 2278 ntBASIC18.05■□□□□ 0.48
CTSDP07339 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSDP07339 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CTSDP07339 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.04■□□□□ 0.48
CTSDP07339 DUX4L4-201ENST00000566884 1269 ntBASIC18.04■□□□□ 0.48
CTSDP07339 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTSDP07339 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms