Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.094e-7■■■■■ 32.2
DKC1O60832 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.064e-7■■■■■ 32.2
DKC1O60832 CTIF-207ENST00000589585 564 ntTSL 415.4■□□□□ 0.065e-6■■■■■ 32.2
DKC1O60832 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.044e-7■■■■■ 32.2
DKC1O60832 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.98□□□□□ -0.014e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.074e-7■■■■■ 32.2
DKC1O60832 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.094e-7■■■■■ 32.2
DKC1O60832 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.154e-7■■■■■ 32.2
DKC1O60832 MEF2A-206ENST00000558049 565 ntTSL 414.07□□□□□ -0.164e-7■■■■■ 32.2
DKC1O60832 MYO18A-221ENST00000590242 637 ntTSL 213.81□□□□□ -0.24e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-213ENST00000514179 2200 ntTSL 213.75□□□□□ -0.214e-7■■■■■ 32.2
DKC1O60832 CASKIN1-203ENST00000564289 193 ntTSL 313.58□□□□□ -0.244e-7■■■■■ 32.2
DKC1O60832 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC13.47□□□□□ -0.254e-7■■■■■ 32.2
DKC1O60832 USP10-207ENST00000563048 1315 ntTSL 213.29□□□□□ -0.284e-7■■■■■ 32.2
DKC1O60832 USP10-202ENST00000540269 3070 ntTSL 1 (best)13.25□□□□□ -0.294e-7■■■■■ 32.2
DKC1O60832 MYO18A-219ENST00000585573 319 ntTSL 313.06□□□□□ -0.324e-7■■■■■ 32.2
DKC1O60832 SLC38A11-201ENST00000303735 3737 ntTSL 2 BASIC12.71□□□□□ -0.374e-7■■■■■ 32.2
DKC1O60832 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.44e-7■■■■■ 32.2
DKC1O60832 USP10-219ENST00000570191 2717 ntTSL 2 BASIC12.22□□□□□ -0.454e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC11.58□□□□□ -0.564e-7■■■■■ 32.2
DKC1O60832 USP10-215ENST00000569038 730 ntTSL 311.43□□□□□ -0.584e-7■■■■■ 32.2
DKC1O60832 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.68e-10■■■■■ 32.2
DKC1O60832 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.614e-7■■■■■ 32.2
DKC1O60832 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.634e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-214ENST00000515170 4103 ntTSL 210.94□□□□□ -0.664e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.674e-7■■■■■ 32.2
DKC1O60832 CCNY-208ENST00000492478 809 ntTSL 510.03□□□□□ -0.84e-7■■■■■ 32.2
DKC1O60832 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.914e-7■■■■■ 32.2
DKC1O60832 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC9.27□□□□□ -0.934e-7■■■■■ 32.2
DKC1O60832 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC9.22□□□□□ -0.934e-7■■■■■ 32.2
DKC1O60832 TMEM225B-201ENST00000429679 482 ntTSL 38.89□□□□□ -0.994e-7■■■■■ 32.2
DKC1O60832 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.024e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.134e-7■■■■■ 32.2
DKC1O60832 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.64□□□□□ -1.194e-7■■■■■ 32.2
DKC1O60832 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.44□□□□□ -1.224e-7■■■■■ 32.2
DKC1O60832 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.274e-7■■■■■ 32.2
DKC1O60832 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.04□□□□□ -1.288e-10■■■■■ 32.2
DKC1O60832 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.92□□□□□ -1.34e-7■■■■■ 32.2
DKC1O60832 SLC44A1-204ENST00000436716 576 ntTSL 56.83□□□□□ -1.324e-7■■■■■ 32.2
DKC1O60832 SLC38A11-207ENST00000470576 696 ntTSL 36.41□□□□□ -1.384e-7■■■■■ 32.2
DKC1O60832 USP10-206ENST00000563023 574 ntTSL 46.11□□□□□ -1.434e-7■■■■■ 32.2
DKC1O60832 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.444e-7■■■■■ 32.2
DKC1O60832 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.524e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-212ENST00000513227 560 ntTSL 45.08□□□□□ -1.64e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-205ENST00000504575 552 ntTSL 45.08□□□□□ -1.64e-7■■■■■ 32.2
DKC1O60832 USP10-218ENST00000570053 502 ntTSL 35.01□□□□□ -1.614e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.644e-7■■■■■ 32.2
DKC1O60832 CCNY-206ENST00000470025 346 ntTSL 54.7□□□□□ -1.664e-7■■■■■ 32.2
DKC1O60832 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.664e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-204ENST00000504039 542 ntTSL 44.56□□□□□ -1.684e-7■■■■■ 32.2
DKC1O60832 SLC38A11-208ENST00000483641 786 ntTSL 24.31□□□□□ -1.724e-7■■■■■ 32.2
DKC1O60832 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.864e-7■■■■■ 32.2
DKC1O60832 SLC38A11-205ENST00000424914 452 ntTSL 53.24□□□□□ -1.894e-7■■■■■ 32.2
DKC1O60832 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.88□□□□□ -1.954e-7■■■■■ 32.2
DKC1O60832 USP10-213ENST00000566512 575 ntTSL 22.38□□□□□ -2.034e-7■■■■■ 32.2
DKC1O60832 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.244e-7■■■■■ 32.2
DKC1O60832 FOXN3-206ENST00000554005 450 ntTSL 54.91□□□□□ -1.624e-13■■■■■ 32.2
DKC1O60832 FOXN3-210ENST00000555658 648 ntTSL 34.53□□□□□ -1.684e-13■■■■■ 32.2
DKC1O60832 SNORD11-201ENST00000459124 84 ntBASIC0.75□□□□□ -2.296e-7■■■■■ 32.1
DKC1O60832 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.11e-33■■■■■ 32.1
DKC1O60832 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.4■□□□□ 0.541e-33■■■■■ 32.1
DKC1O60832 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.73■□□□□ 0.271e-33■■■■■ 32.1
DKC1O60832 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.25■□□□□ 0.031e-33■■■■■ 32.1
DKC1O60832 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.91■■■□□ 2.061e-7■■■■■ 32
DKC1O60832 PTPRF-207ENST00000436724 2168 ntTSL 1 (best)23.2■■□□□ 1.31e-7■■■■■ 32
DKC1O60832 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)15.16■□□□□ 0.021e-7■■■■■ 32
DKC1O60832 PTPRF-208ENST00000437607 788 ntTSL 1 (best)13.42□□□□□ -0.261e-7■■■■■ 32
DKC1O60832 RBCK1-210ENST00000441733 961 ntTSL 519.75■□□□□ 0.753e-76■■■■■ 32
DKC1O60832 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.18■□□□□ 0.663e-76■■■■■ 32
DKC1O60832 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.61■□□□□ 0.573e-76■■■■■ 32
DKC1O60832 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.513e-76■■■■■ 32
DKC1O60832 RBCK1-209ENST00000415942 2613 ntTSL 517.85■□□□□ 0.453e-76■■■■■ 32
DKC1O60832 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.78■□□□□ 0.283e-76■■■■■ 32
DKC1O60832 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)16.61■□□□□ 0.253e-76■■■■■ 32
DKC1O60832 RBCK1-208ENST00000414880 765 ntTSL 315.73■□□□□ 0.113e-76■■■■■ 32
DKC1O60832 RBCK1-207ENST00000411647 593 ntTSL 311.05□□□□□ -0.643e-76■■■■■ 32
DKC1O60832 MSI2-210ENST00000579505 577 ntTSL 320.17■□□□□ 0.822e-8■■■■■ 31.9
DKC1O60832 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.671e-323■■■■■ 31.9
DKC1O60832 EIF4A1-207ENST00000578324 1577 ntTSL 517.7■□□□□ 0.421e-323■■■■■ 31.9
DKC1O60832 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.391e-323■■■■■ 31.9
DKC1O60832 EIF4A1-218ENST00000581544 1444 ntTSL 212.57□□□□□ -0.41e-323■■■■■ 31.9
DKC1O60832 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.24□□□□□ -0.451e-323■■■■■ 31.9
DKC1O60832 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC11.9□□□□□ -0.51e-323■■■■■ 31.9
DKC1O60832 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.531e-323■■■■■ 31.9
DKC1O60832 EIF4A1-202ENST00000396527 1169 ntTSL 28.47□□□□□ -1.051e-323■■■■■ 31.9
DKC1O60832 HFM1-204ENST00000448819 540 ntTSL 510.43□□□□□ -0.742e-14■■■■■ 31.9
DKC1O60832 HFM1-208ENST00000488023 1699 ntTSL 54□□□□□ -1.772e-14■■■■■ 31.9
DKC1O60832 HFM1-202ENST00000427444 672 ntTSL 53.54□□□□□ -1.842e-14■■■■■ 31.9
DKC1O60832 HFM1-207ENST00000481900 2020 ntTSL 53.4□□□□□ -1.872e-14■■■■■ 31.9
DKC1O60832 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.142e-14■■■■■ 31.9
DKC1O60832 HPCAL1-205ENST00000423674 586 ntTSL 425.67■■□□□ 1.72e-6■■■■■ 31.8
DKC1O60832 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.342e-6■■■■■ 31.8
DKC1O60832 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.63■■■□□ 2.813e-6■■■■■ 31.8
DKC1O60832 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.323e-6■■■■■ 31.8
DKC1O60832 FAM19A5-205ENST00000473898 897 ntTSL 222.03■■□□□ 1.123e-6■■■■■ 31.8
DKC1O60832 BAG6-250ENST00000451898 993 ntTSL 321.01■□□□□ 0.952e-14■■■■■ 31.7
DKC1O60832 BAG6-248ENST00000441054 654 ntTSL 319.84■□□□□ 0.772e-14■■■■■ 31.7
DKC1O60832 BAG6-240ENST00000424480 1056 ntTSL 218.82■□□□□ 0.62e-14■■■■■ 31.7
DKC1O60832 BAG6-245ENST00000437771 2407 ntTSL 516.54■□□□□ 0.242e-14■■■■■ 31.7
DKC1O60832 BAG6-244ENST00000435080 1710 ntTSL 516.24■□□□□ 0.192e-14■■■■■ 31.7
Retrieved 100 of 8,567 protein–RNA pairs in 36.2 ms