RNA–Protein interactions for RNA: ENST00000443035.7

DENND4A-202, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene DENND4A, Length 8,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-202ENST00000443035 DNAJC5BQ9UF47 199 aa6.98□□□□□ -1.29
DENND4A-202ENST00000443035 TRIM41Q8WV44 630 aa6.7□□□□□ -1.34
DENND4A-202ENST00000443035 PABPN1Q86U42 306 aaKnown RBP eCLIP6.16□□□□□ -1.42
DENND4A-202ENST00000443035 ILDR1Q86SU0 546 aaPredicted RBP6.12□□□□□ -1.43
DENND4A-202ENST00000443035 DNAJC5Q9H3Z4 198 aa6.03□□□□□ -1.44
DENND4A-202ENST00000443035 DCAF8L2P0C7V8 631 aa5.95□□□□□ -1.46
DENND4A-202ENST00000443035 SENP3Q9H4L4 574 aaPredicted RBP5.94□□□□□ -1.46
DENND4A-202ENST00000443035 AEBP2Q6ZN18 517 aaPredicted RBP5.92□□□□□ -1.46
DENND4A-202ENST00000443035 ABCC9O60706 1549 aa5.91□□□□□ -1.46
DENND4A-202ENST00000443035 ILDR2Q71H61 639 aa5.88□□□□□ -1.47
DENND4A-202ENST00000443035 TRHP20396 242 aaPredicted RBP5.71□□□□□ -1.5
DENND4A-202ENST00000443035 PLPPR3Q6T4P5 718 aa5.7□□□□□ -1.5
DENND4A-202ENST00000443035 TTBK1Q5TCY1 1321 aaPredicted RBP5.47□□□□□ -1.53
DENND4A-202ENST00000443035 CYB5RLQ6IPT4 315 aa5.38□□□□□ -1.55
DENND4A-202ENST00000443035 KDM4FA0A1W2PPD8 638 aa5.24□□□□□ -1.57
DENND4A-202ENST00000443035 CAPN15O75808 1086 aa5.16□□□□□ -1.58
DENND4A-202ENST00000443035 DISP3Q9P2K9 1392 aa5.15□□□□□ -1.58
DENND4A-202ENST00000443035 FBLN2P98095 1184 aa5.13□□□□□ -1.59
DENND4A-202ENST00000443035 HSPA2P54652 639 aa5.11□□□□□ -1.59
DENND4A-202ENST00000443035 ARID3CA6NKF2 412 aa5.03□□□□□ -1.61
DENND4A-202ENST00000443035 EHMT2Q96KQ7 1210 aa4.99□□□□□ -1.61
DENND4A-202ENST00000443035 SCAF1Q9H7N4 1312 aaKnown RBP4.98□□□□□ -1.61
DENND4A-202ENST00000443035 SOCS7O14512 581 aa4.98□□□□□ -1.61
DENND4A-202ENST00000443035 LMTK3Q96Q04 1460 aa4.97□□□□□ -1.61
DENND4A-202ENST00000443035 PIP4K2BP78356 416 aa4.94□□□□□ -1.62
DENND4A-202ENST00000443035 PHF23Q9BUL5 403 aaPredicted RBP4.93□□□□□ -1.62
DENND4A-202ENST00000443035 NISCHQ9Y2I1 1504 aa4.92□□□□□ -1.62
DENND4A-202ENST00000443035 RBM33Q96EV2 1170 aaKnown RBP4.92□□□□□ -1.62
DENND4A-202ENST00000443035 PLEKHG5O94827 1062 aa4.91□□□□□ -1.62
DENND4A-202ENST00000443035 CECR2Q9BXF3 1484 aa4.9□□□□□ -1.63
DENND4A-202ENST00000443035 NESP48681 1621 aa4.86□□□□□ -1.63
DENND4A-202ENST00000443035 CHIC1Q5VXU3 224 aa4.86□□□□□ -1.63
DENND4A-202ENST00000443035 MLECQ14165 292 aa4.84□□□□□ -1.63
DENND4A-202ENST00000443035 SHROOM4Q9ULL8 1493 aa4.81□□□□□ -1.64
DENND4A-202ENST00000443035 FBXO41Q8TF61 875 aa4.81□□□□□ -1.64
DENND4A-202ENST00000443035 POTEAQ6S8J7 498 aa4.81□□□□□ -1.64
DENND4A-202ENST00000443035 TRIM52Q96A61 297 aa4.79□□□□□ -1.64
DENND4A-202ENST00000443035 CEBPAP49715 358 aaPredicted RBP4.79□□□□□ -1.64
DENND4A-202ENST00000443035 RANGAP1P46060 587 aaPredicted RBP4.78□□□□□ -1.64
DENND4A-202ENST00000443035 WWC3Q9ULE0 1092 aa4.76□□□□□ -1.65
DENND4A-202ENST00000443035 RGS17Q9UGC6 210 aaPredicted RBP4.73□□□□□ -1.65
DENND4A-202ENST00000443035 CERKQ8TCT0 537 aa4.72□□□□□ -1.65
DENND4A-202ENST00000443035 OSCARQ8IYS5 282 aa4.72□□□□□ -1.65
DENND4A-202ENST00000443035 PSDA5PKW4 1024 aaPredicted RBP4.71□□□□□ -1.65
DENND4A-202ENST00000443035 PCDH10Q9P2E7 1040 aa4.7□□□□□ -1.66
DENND4A-202ENST00000443035 SYNJ2O15056 1496 aa4.69□□□□□ -1.66
DENND4A-202ENST00000443035 FAM69CQ0P6D2 419 aa4.68□□□□□ -1.66
DENND4A-202ENST00000443035 HSPA1LP34931 641 aa4.68□□□□□ -1.66
DENND4A-202ENST00000443035 ERCC6Q03468 1493 aa4.68□□□□□ -1.66
DENND4A-202ENST00000443035 RBAK-RBAKDNI3L0D1 243 aa4.67□□□□□ -1.66
DENND4A-202ENST00000443035 SENP3-EIF4A1A0A087X0R7 540 aa4.65□□□□□ -1.66
DENND4A-202ENST00000443035 FAM182BQ5T319 152 aa4.63□□□□□ -1.67
DENND4A-202ENST00000443035 HTRA3P83110 453 aa4.63□□□□□ -1.67
DENND4A-202ENST00000443035 NCKAP5LQ9HCH0 1330 aa4.6□□□□□ -1.67
DENND4A-202ENST00000443035 NUTM2BA6NNL0 878 aaPredicted RBP4.59□□□□□ -1.67
DENND4A-202ENST00000443035 NUTM2EB1AL46 878 aaPredicted RBP4.59□□□□□ -1.67
DENND4A-202ENST00000443035 FOXD1Q16676 465 aa4.59□□□□□ -1.67
DENND4A-202ENST00000443035 NUTM2AQ8IVF1 878 aaPredicted RBP4.59□□□□□ -1.67
DENND4A-202ENST00000443035 ZNF526Q8TF50 670 aaPredicted RBP4.59□□□□□ -1.67
DENND4A-202ENST00000443035 KCNH8Q96L42 1107 aa4.57□□□□□ -1.68
DENND4A-202ENST00000443035 DDX17Q92841 729 aaKnown RBP4.55□□□□□ -1.68
DENND4A-202ENST00000443035 ZNF335Q9H4Z2 1342 aaPredicted RBP4.54□□□□□ -1.68
DENND4A-202ENST00000443035 UPF1Q92900 1129 aaKnown RBP eCLIP4.53□□□□□ -1.68
DENND4A-202ENST00000443035 SMARCA2P51531 1590 aa4.52□□□□□ -1.69
DENND4A-202ENST00000443035 IFFO2Q5TF58 517 aa4.52□□□□□ -1.69
DENND4A-202ENST00000443035 RAPGEFL1Q9UHV5 662 aa4.52□□□□□ -1.69
DENND4A-202ENST00000443035 P3H3Q8IVL6 736 aa4.51□□□□□ -1.69
DENND4A-202ENST00000443035 ARID4BQ4LE39 1312 aaPredicted RBP4.49□□□□□ -1.69
DENND4A-202ENST00000443035 NUTM2DQ5VT03 806 aaPredicted RBP4.49□□□□□ -1.69
DENND4A-202ENST00000443035 DEFB132Q7Z7B7 95 aa4.49□□□□□ -1.69
DENND4A-202ENST00000443035 MYO15BQ96JP2 1530 aa4.48□□□□□ -1.69
DENND4A-202ENST00000443035 MPNDQ8N594 471 aa4.48□□□□□ -1.69
DENND4A-202ENST00000443035 UBAP1LF5GYI3 381 aa4.48□□□□□ -1.69
DENND4A-202ENST00000443035 AQRO60306 1485 aaKnown RBP eCLIP4.46□□□□□ -1.69
DENND4A-202ENST00000443035 SMIM5Q71RC9 77 aa4.45□□□□□ -1.7
DENND4A-202ENST00000443035 PELP1Q8IZL8 1130 aaKnown RBP4.44□□□□□ -1.7
DENND4A-202ENST00000443035 ARAP1Q96P48 1450 aa4.44□□□□□ -1.7
DENND4A-202ENST00000443035 ZNF608Q9ULD9 1512 aaPredicted RBP4.42□□□□□ -1.7
DENND4A-202ENST00000443035 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
DENND4A-202ENST00000443035 COL13A1Q5TAT6 717 aaPredicted RBP4.41□□□□□ -1.7
DENND4A-202ENST00000443035 KLHL34Q8N239 644 aa4.4□□□□□ -1.7
DENND4A-202ENST00000443035 YY1P25490 414 aa4.39□□□□□ -1.71
DENND4A-202ENST00000443035 COL17A1Q9UMD9 1497 aaPredicted RBP4.38□□□□□ -1.71
DENND4A-202ENST00000443035 CC2D2AQ9P2K1 1620 aa4.37□□□□□ -1.71
DENND4A-202ENST00000443035 PDGFDQ9GZP0 370 aaPredicted RBP4.37□□□□□ -1.71
DENND4A-202ENST00000443035 CFAP44Q96MT7 982 aa4.36□□□□□ -1.71
DENND4A-202ENST00000443035 RAPGEF3O95398 923 aa4.36□□□□□ -1.71
DENND4A-202ENST00000443035 MYT1LQ9UL68 1186 aa4.36□□□□□ -1.71
DENND4A-202ENST00000443035 R3HDM1Q15032 1099 aaKnown RBP4.35□□□□□ -1.71
DENND4A-202ENST00000443035 PDS5BQ9NTI5 1447 aa4.35□□□□□ -1.71
DENND4A-202ENST00000443035 ZIC2O95409 532 aaPredicted RBP4.34□□□□□ -1.71
DENND4A-202ENST00000443035 UTRNP46939 3433 aa4.33□□□□□ -1.72
DENND4A-202ENST00000443035 ADGRL1O94910 1474 aa4.31□□□□□ -1.72
DENND4A-202ENST00000443035 HECW2Q9P2P5 1572 aa4.31□□□□□ -1.72
DENND4A-202ENST00000443035 ATF5Q9Y2D1 282 aaPredicted RBP4.31□□□□□ -1.72
DENND4A-202ENST00000443035 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
DENND4A-202ENST00000443035 CCDC180Q9P1Z9 1646 aa4.3□□□□□ -1.72
DENND4A-202ENST00000443035 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.3□□□□□ -1.72
DENND4A-202ENST00000443035 ARHGEF11O15085 1522 aa4.29□□□□□ -1.72
DENND4A-202ENST00000443035 CHMP7Q8WUX9 453 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms