RNA–Protein interactions for RNA: ENST00000569038.5

USP10-215, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 3

Gene USP10, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-215ENST00000569038 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
USP10-215ENST00000569038 ABCC9O60706 1549 aa26.71■■□□□ 1.87
USP10-215ENST00000569038 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
USP10-215ENST00000569038 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
USP10-215ENST00000569038 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
USP10-215ENST00000569038 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
USP10-215ENST00000569038 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
USP10-215ENST00000569038 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
USP10-215ENST00000569038 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
USP10-215ENST00000569038 NACADO15069 1562 aa24.47■■□□□ 1.51
USP10-215ENST00000569038 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
USP10-215ENST00000569038 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
USP10-215ENST00000569038 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
USP10-215ENST00000569038 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
USP10-215ENST00000569038 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
USP10-215ENST00000569038 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
USP10-215ENST00000569038 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
USP10-215ENST00000569038 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
USP10-215ENST00000569038 CUX2O14529 1486 aa23.49■■□□□ 1.35
USP10-215ENST00000569038 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
USP10-215ENST00000569038 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
USP10-215ENST00000569038 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
USP10-215ENST00000569038 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
USP10-215ENST00000569038 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
USP10-215ENST00000569038 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
USP10-215ENST00000569038 NESP48681 1621 aa22.66■■□□□ 1.22
USP10-215ENST00000569038 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
USP10-215ENST00000569038 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
USP10-215ENST00000569038 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
USP10-215ENST00000569038 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
USP10-215ENST00000569038 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.16
USP10-215ENST00000569038 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
USP10-215ENST00000569038 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
USP10-215ENST00000569038 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
USP10-215ENST00000569038 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
USP10-215ENST00000569038 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
USP10-215ENST00000569038 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
USP10-215ENST00000569038 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
USP10-215ENST00000569038 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
USP10-215ENST00000569038 WDR62O43379 1518 aa22.08■■□□□ 1.13
USP10-215ENST00000569038 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
USP10-215ENST00000569038 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
USP10-215ENST00000569038 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
USP10-215ENST00000569038 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
USP10-215ENST00000569038 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
USP10-215ENST00000569038 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
USP10-215ENST00000569038 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
USP10-215ENST00000569038 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
USP10-215ENST00000569038 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
USP10-215ENST00000569038 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
USP10-215ENST00000569038 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
USP10-215ENST00000569038 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
USP10-215ENST00000569038 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
USP10-215ENST00000569038 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
USP10-215ENST00000569038 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
USP10-215ENST00000569038 CFTRP13569 1480 aa21.39■■□□□ 1.02
USP10-215ENST00000569038 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
USP10-215ENST00000569038 CHD1O14646 1710 aa21.35■■□□□ 1.01
USP10-215ENST00000569038 ILDR1Q86SU0 546 aaPredicted RBP21.35■■□□□ 1.01
USP10-215ENST00000569038 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
USP10-215ENST00000569038 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
USP10-215ENST00000569038 WIZO95785 1651 aa21.27■■□□□ 1
USP10-215ENST00000569038 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
USP10-215ENST00000569038 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
USP10-215ENST00000569038 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■■ 30
USP10-215ENST00000569038 FBLN2P98095 1184 aa21.1■□□□□ 0.97
USP10-215ENST00000569038 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
USP10-215ENST00000569038 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
USP10-215ENST00000569038 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
USP10-215ENST00000569038 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
USP10-215ENST00000569038 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
USP10-215ENST00000569038 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
USP10-215ENST00000569038 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.94
USP10-215ENST00000569038 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
USP10-215ENST00000569038 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
USP10-215ENST00000569038 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
USP10-215ENST00000569038 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
USP10-215ENST00000569038 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
USP10-215ENST00000569038 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
USP10-215ENST00000569038 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
USP10-215ENST00000569038 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
USP10-215ENST00000569038 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
USP10-215ENST00000569038 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
USP10-215ENST00000569038 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
USP10-215ENST00000569038 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
USP10-215ENST00000569038 SOGA1O94964 1423 aa20.65■□□□□ 0.9
USP10-215ENST00000569038 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
USP10-215ENST00000569038 KDM6BO15054 1643 aa20.52■□□□□ 0.88
USP10-215ENST00000569038 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
USP10-215ENST00000569038 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
USP10-215ENST00000569038 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
USP10-215ENST00000569038 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
USP10-215ENST00000569038 ABCC10Q5T3U5 1492 aa20.5■□□□□ 0.87
USP10-215ENST00000569038 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
USP10-215ENST00000569038 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
USP10-215ENST00000569038 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
USP10-215ENST00000569038 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
USP10-215ENST00000569038 ADGRL1O94910 1474 aa20.39■□□□□ 0.85
USP10-215ENST00000569038 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
USP10-215ENST00000569038 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms