RNA–Protein interactions for RNA: ENST00000570191.5

USP10-219, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2 BASIC

Gene USP10, Length 2,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-219ENST00000570191 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
USP10-219ENST00000570191 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
USP10-219ENST00000570191 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.06
USP10-219ENST00000570191 ABCC9O60706 1549 aa21.57■■□□□ 1.04
USP10-219ENST00000570191 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
USP10-219ENST00000570191 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
USP10-219ENST00000570191 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
USP10-219ENST00000570191 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
USP10-219ENST00000570191 NACADO15069 1562 aa20.62■□□□□ 0.89
USP10-219ENST00000570191 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
USP10-219ENST00000570191 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
USP10-219ENST00000570191 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
USP10-219ENST00000570191 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
USP10-219ENST00000570191 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
USP10-219ENST00000570191 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
USP10-219ENST00000570191 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
USP10-219ENST00000570191 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
USP10-219ENST00000570191 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
USP10-219ENST00000570191 HRCP23327 699 aa19.79■□□□□ 0.76
USP10-219ENST00000570191 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
USP10-219ENST00000570191 WIZO95785 1651 aa19.62■□□□□ 0.73
USP10-219ENST00000570191 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
USP10-219ENST00000570191 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
USP10-219ENST00000570191 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
USP10-219ENST00000570191 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
USP10-219ENST00000570191 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
USP10-219ENST00000570191 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.68
USP10-219ENST00000570191 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
USP10-219ENST00000570191 MYT1Q01538 1121 aa19.28■□□□□ 0.68
USP10-219ENST00000570191 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
USP10-219ENST00000570191 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
USP10-219ENST00000570191 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
USP10-219ENST00000570191 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
USP10-219ENST00000570191 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
USP10-219ENST00000570191 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
USP10-219ENST00000570191 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
USP10-219ENST00000570191 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
USP10-219ENST00000570191 HMGXB3Q12766 1538 aa19■□□□□ 0.63
USP10-219ENST00000570191 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
USP10-219ENST00000570191 NESP48681 1621 aa18.9■□□□□ 0.62
USP10-219ENST00000570191 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
USP10-219ENST00000570191 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
USP10-219ENST00000570191 FAM9AQ8IZU1 332 aaPredicted RBP18.75■□□□□ 0.59
USP10-219ENST00000570191 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
USP10-219ENST00000570191 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
USP10-219ENST00000570191 CFTRP13569 1480 aa18.71■□□□□ 0.59
USP10-219ENST00000570191 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
USP10-219ENST00000570191 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
USP10-219ENST00000570191 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
USP10-219ENST00000570191 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
USP10-219ENST00000570191 CUX1P39880 1505 aa18.48■□□□□ 0.55
USP10-219ENST00000570191 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
USP10-219ENST00000570191 SOGA1O94964 1423 aa18.47■□□□□ 0.55
USP10-219ENST00000570191 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
USP10-219ENST00000570191 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
USP10-219ENST00000570191 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
USP10-219ENST00000570191 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
USP10-219ENST00000570191 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
USP10-219ENST00000570191 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
USP10-219ENST00000570191 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
USP10-219ENST00000570191 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
USP10-219ENST00000570191 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
USP10-219ENST00000570191 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
USP10-219ENST00000570191 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
USP10-219ENST00000570191 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
USP10-219ENST00000570191 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
USP10-219ENST00000570191 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
USP10-219ENST00000570191 NEUROD1Q13562 356 aa18.3■□□□□ 0.52
USP10-219ENST00000570191 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
USP10-219ENST00000570191 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
USP10-219ENST00000570191 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
USP10-219ENST00000570191 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
USP10-219ENST00000570191 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
USP10-219ENST00000570191 DNMBPQ6XZF7 1577 aa18.22■□□□□ 0.51
USP10-219ENST00000570191 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
USP10-219ENST00000570191 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
USP10-219ENST00000570191 CUX2O14529 1486 aa18.19■□□□□ 0.5
USP10-219ENST00000570191 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
USP10-219ENST00000570191 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
USP10-219ENST00000570191 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
USP10-219ENST00000570191 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.499e-7■■■■■ 27.8
USP10-219ENST00000570191 WDR62O43379 1518 aa18.08■□□□□ 0.48
USP10-219ENST00000570191 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
USP10-219ENST00000570191 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
USP10-219ENST00000570191 IGF1RP08069 1367 aa18.04■□□□□ 0.48
USP10-219ENST00000570191 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
USP10-219ENST00000570191 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
USP10-219ENST00000570191 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
USP10-219ENST00000570191 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
USP10-219ENST00000570191 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
USP10-219ENST00000570191 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
USP10-219ENST00000570191 FBLN2P98095 1184 aa17.95■□□□□ 0.46
USP10-219ENST00000570191 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
USP10-219ENST00000570191 EEA1Q15075 1411 aa17.92■□□□□ 0.46
USP10-219ENST00000570191 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
USP10-219ENST00000570191 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
USP10-219ENST00000570191 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
USP10-219ENST00000570191 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
USP10-219ENST00000570191 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
USP10-219ENST00000570191 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms