Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC53A6NM62 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LRRC53A6NM62 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
LRRC53A6NM62 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.55■■□□□ 1.36
LRRC53A6NM62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC53A6NM62 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC53A6NM62 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC53A6NM62 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC53A6NM62 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 FAM99A-202ENST00000538190 1989 ntBASIC23.53■■□□□ 1.36
LRRC53A6NM62 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 AL117332.1-201ENST00000622628 974 ntBASIC23.53■■□□□ 1.36
LRRC53A6NM62 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
LRRC53A6NM62 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC53A6NM62 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC53A6NM62 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC53A6NM62 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC53A6NM62 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC53A6NM62 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
LRRC53A6NM62 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
LRRC53A6NM62 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
LRRC53A6NM62 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC53A6NM62 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRC53A6NM62 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRRC53A6NM62 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.5■■□□□ 1.35
LRRC53A6NM62 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.5■■□□□ 1.35
LRRC53A6NM62 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRC53A6NM62 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC53A6NM62 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC53A6NM62 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LRRC53A6NM62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC53A6NM62 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC53A6NM62 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRC53A6NM62 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.48■■□□□ 1.35
LRRC53A6NM62 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.48■■□□□ 1.35
LRRC53A6NM62 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
LRRC53A6NM62 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 AC026310.3-201ENST00000625186 2373 ntBASIC23.48■■□□□ 1.35
LRRC53A6NM62 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LRRC53A6NM62 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
LRRC53A6NM62 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC53A6NM62 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC53A6NM62 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LRRC53A6NM62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC53A6NM62 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRC53A6NM62 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms