Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PCDHAC2Q9Y5I4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCDHAC2Q9Y5I4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHAC2Q9Y5I4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.33■■□□□ 1.81
PCDHAC2Q9Y5I4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHAC2Q9Y5I4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 AC010141.3-201ENST00000456659 717 ntBASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 AC011767.1-201ENST00000617410 1153 ntBASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHAC2Q9Y5I4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 AC026185.1-201ENST00000445748 174 ntBASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 AC104771.1-201ENST00000603335 964 ntBASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PCDHAC2Q9Y5I4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 BID-214ENST00000617586 542 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHAC2Q9Y5I4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHAC2Q9Y5I4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHAC2Q9Y5I4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
PCDHAC2Q9Y5I4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHAC2Q9Y5I4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDHAC2Q9Y5I4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDHAC2Q9Y5I4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHAC2Q9Y5I4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHAC2Q9Y5I4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHAC2Q9Y5I4 ESRRAP2-201ENST00000418437 1549 ntBASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 AC068587.7-201ENST00000641602 218 ntBASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHAC2Q9Y5I4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 OXCT2P1-201ENST00000447263 1535 ntBASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
PCDHAC2Q9Y5I4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 KRT19P1-201ENST00000405746 1186 ntBASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHAC2Q9Y5I4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms