Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 OR2I1P-207ENST00000453522 948 ntBASIC19.1■□□□□ 0.65
CDH20Q9HBT6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.1■□□□□ 0.65
CDH20Q9HBT6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDH20Q9HBT6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH20Q9HBT6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH20Q9HBT6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH20Q9HBT6 EDA-201ENST00000338901 1233 ntBASIC19.09■□□□□ 0.65
CDH20Q9HBT6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH20Q9HBT6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH20Q9HBT6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH20Q9HBT6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH20Q9HBT6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
CDH20Q9HBT6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDH20Q9HBT6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CDH20Q9HBT6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CDH20Q9HBT6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 AC133561.4-201ENST00000566112 224 ntBASIC19.07■□□□□ 0.64
CDH20Q9HBT6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 AL355001.2-201ENST00000620617 1191 ntBASIC19.07■□□□□ 0.64
CDH20Q9HBT6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH20Q9HBT6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 BX842568.3-201ENST00000418104 571 ntBASIC19.06■□□□□ 0.64
CDH20Q9HBT6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 SLC47A1P1-202ENST00000449666 945 ntBASIC19.06■□□□□ 0.64
CDH20Q9HBT6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 AC008764.7-201ENST00000593779 1081 ntBASIC19.06■□□□□ 0.64
CDH20Q9HBT6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH20Q9HBT6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 AC010525.1-201ENST00000585559 441 ntBASIC19.05■□□□□ 0.64
CDH20Q9HBT6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH20Q9HBT6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 AC027682.1-201ENST00000562846 899 ntBASIC19.04■□□□□ 0.64
CDH20Q9HBT6 AC142381.2-201ENST00000566120 298 ntBASIC19.04■□□□□ 0.64
CDH20Q9HBT6 AC233992.3-201ENST00000607491 485 ntBASIC19.04■□□□□ 0.64
CDH20Q9HBT6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms