Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 AC009086.3-201ENST00000623486 1008 ntBASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD4Q9H0A8 AC005703.6-201ENST00000623265 1329 ntBASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD4Q9H0A8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 LINC01960-201ENST00000563759 1884 ntBASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD4Q9H0A8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD4Q9H0A8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD4Q9H0A8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD4Q9H0A8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 AL033527.3-201ENST00000566366 1196 ntBASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.26■□□□□ 0.67
COMMD4Q9H0A8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 YBX1P4-201ENST00000392794 808 ntBASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD4Q9H0A8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 AC137630.3-201ENST00000607245 391 ntBASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 AL137060.1-201ENST00000618151 2648 ntBASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD4Q9H0A8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 MIR6722-201ENST00000617286 78 ntBASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms