Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCRT1Q9BWW7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
SCRT1Q9BWW7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCRT1Q9BWW7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.51■□□□□ 0.39
SCRT1Q9BWW7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.51■□□□□ 0.39
SCRT1Q9BWW7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 KRT18P60-201ENST00000312876 1297 ntBASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 AC011551.1-201ENST00000614101 683 ntBASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 AC131274.2-201ENST00000580697 1507 ntBASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.5■□□□□ 0.39
SCRT1Q9BWW7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCRT1Q9BWW7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 AC087742.1-201ENST00000575880 1738 ntBASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCRT1Q9BWW7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 ALDH1A3-203ENST00000557963 1670 ntBASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
SCRT1Q9BWW7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCRT1Q9BWW7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCRT1Q9BWW7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCRT1Q9BWW7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SCRT1Q9BWW7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.46■□□□□ 0.38
SCRT1Q9BWW7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT1Q9BWW7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms