Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.74■■□□□ 1.23
RFX6Q8HWS3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RFX6Q8HWS3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 AC092053.2-201ENST00000640557 1818 ntBASIC22.73■■□□□ 1.23
RFX6Q8HWS3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 AL356441.2-201ENST00000443009 864 ntBASIC22.73■■□□□ 1.23
RFX6Q8HWS3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 AC099791.2-201ENST00000605725 427 ntBASIC22.73■■□□□ 1.23
RFX6Q8HWS3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.73■■□□□ 1.23
RFX6Q8HWS3 PKD1P6-201ENST00000343738 4769 ntBASIC22.73■■□□□ 1.23
RFX6Q8HWS3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.72■■□□□ 1.23
RFX6Q8HWS3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 pRNA.6-201ENST00000610482 90 ntBASIC22.72■■□□□ 1.23
RFX6Q8HWS3 pRNA.5-201ENST00000612139 90 ntBASIC22.72■■□□□ 1.23
RFX6Q8HWS3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 pRNA.11-201ENST00000618423 90 ntBASIC22.72■■□□□ 1.23
RFX6Q8HWS3 pRNA.13-201ENST00000619112 90 ntBASIC22.72■■□□□ 1.23
RFX6Q8HWS3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RFX6Q8HWS3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RFX6Q8HWS3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFX6Q8HWS3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.69■■□□□ 1.22
RFX6Q8HWS3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFX6Q8HWS3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms