Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCS2P54868 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCS2P54868 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCS2P54868 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.56■■□□□ 1.68
HMGCS2P54868 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.56■■□□□ 1.68
HMGCS2P54868 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCS2P54868 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.56■■□□□ 1.68
HMGCS2P54868 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
HMGCS2P54868 ABCB10P4-201ENST00000566803 2184 ntBASIC25.56■■□□□ 1.68
HMGCS2P54868 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.56■■□□□ 1.68
HMGCS2P54868 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCS2P54868 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.55■■□□□ 1.68
HMGCS2P54868 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.55■■□□□ 1.68
HMGCS2P54868 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCS2P54868 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCS2P54868 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.54■■□□□ 1.68
HMGCS2P54868 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.54■■□□□ 1.68
HMGCS2P54868 BID-214ENST00000617586 542 ntTSL 5 BASIC25.54■■□□□ 1.68
HMGCS2P54868 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCS2P54868 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCS2P54868 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.53■■□□□ 1.68
HMGCS2P54868 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.53■■□□□ 1.68
HMGCS2P54868 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCS2P54868 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.53■■□□□ 1.68
HMGCS2P54868 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCS2P54868 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.52■■□□□ 1.68
HMGCS2P54868 AL139125.2-201ENST00000623134 1869 ntBASIC25.52■■□□□ 1.68
HMGCS2P54868 KRT19P1-201ENST00000405746 1186 ntBASIC25.52■■□□□ 1.68
HMGCS2P54868 AC026185.1-201ENST00000445748 174 ntBASIC25.52■■□□□ 1.68
HMGCS2P54868 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCS2P54868 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
HMGCS2P54868 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.51■■□□□ 1.67
HMGCS2P54868 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
HMGCS2P54868 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCS2P54868 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCS2P54868 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCS2P54868 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCS2P54868 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCS2P54868 OXCT2P1-201ENST00000447263 1535 ntBASIC25.5■■□□□ 1.67
HMGCS2P54868 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.5■■□□□ 1.67
HMGCS2P54868 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
HMGCS2P54868 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.5■■□□□ 1.67
HMGCS2P54868 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCS2P54868 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCS2P54868 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCS2P54868 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCS2P54868 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
HMGCS2P54868 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.49■■□□□ 1.67
HMGCS2P54868 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.49■■□□□ 1.67
HMGCS2P54868 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.49■■□□□ 1.67
HMGCS2P54868 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.49■■□□□ 1.67
HMGCS2P54868 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCS2P54868 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCS2P54868 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCS2P54868 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCS2P54868 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCS2P54868 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
HMGCS2P54868 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.48■■□□□ 1.67
HMGCS2P54868 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.47■■□□□ 1.67
HMGCS2P54868 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.47■■□□□ 1.67
HMGCS2P54868 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.47■■□□□ 1.67
HMGCS2P54868 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
HMGCS2P54868 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.47■■□□□ 1.67
HMGCS2P54868 AC079140.4-201ENST00000507448 529 ntBASIC25.47■■□□□ 1.67
HMGCS2P54868 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
HMGCS2P54868 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HMGCS2P54868 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCS2P54868 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCS2P54868 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.46■■□□□ 1.67
HMGCS2P54868 CROCCP5-201ENST00000436658 830 ntBASIC25.46■■□□□ 1.67
HMGCS2P54868 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCS2P54868 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCS2P54868 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCS2P54868 AC104771.1-201ENST00000603335 964 ntBASIC25.46■■□□□ 1.67
HMGCS2P54868 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.46■■□□□ 1.67
HMGCS2P54868 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCS2P54868 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.46■■□□□ 1.67
HMGCS2P54868 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.46■■□□□ 1.67
HMGCS2P54868 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCS2P54868 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCS2P54868 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCS2P54868 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCS2P54868 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCS2P54868 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCS2P54868 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms