Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CCNFP41002 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNFP41002 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNFP41002 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNFP41002 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CCNFP41002 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
CCNFP41002 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCNFP41002 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCNFP41002 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNFP41002 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNFP41002 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNFP41002 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNFP41002 FBXW4P1-201ENST00000426721 2239 ntBASIC22.01■■□□□ 1.11
CCNFP41002 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNFP41002 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNFP41002 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNFP41002 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNFP41002 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22■■□□□ 1.11
CCNFP41002 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22■■□□□ 1.11
CCNFP41002 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22■■□□□ 1.11
CCNFP41002 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22■■□□□ 1.11
CCNFP41002 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNFP41002 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNFP41002 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNFP41002 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
CCNFP41002 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNFP41002 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNFP41002 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNFP41002 AL137060.1-201ENST00000618151 2648 ntBASIC21.99■■□□□ 1.11
CCNFP41002 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNFP41002 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNFP41002 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNFP41002 MIR3621-201ENST00000580529 85 ntBASIC21.99■■□□□ 1.11
CCNFP41002 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNFP41002 AL117332.1-201ENST00000622628 974 ntBASIC21.99■■□□□ 1.11
CCNFP41002 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.99■■□□□ 1.11
CCNFP41002 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNFP41002 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CCNFP41002 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNFP41002 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNFP41002 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.98■■□□□ 1.11
CCNFP41002 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCNFP41002 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNFP41002 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNFP41002 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCNFP41002 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.97■■□□□ 1.11
CCNFP41002 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNFP41002 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNFP41002 SLC25A24-204ENST00000569674 2357 ntBASIC21.97■■□□□ 1.11
CCNFP41002 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNFP41002 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNFP41002 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNFP41002 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNFP41002 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNFP41002 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CCNFP41002 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNFP41002 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.95■■□□□ 1.11
CCNFP41002 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNFP41002 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNFP41002 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNFP41002 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNFP41002 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.95■■□□□ 1.1
CCNFP41002 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNFP41002 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNFP41002 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNFP41002 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNFP41002 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNFP41002 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNFP41002 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNFP41002 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCNFP41002 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCNFP41002 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCNFP41002 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNFP41002 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCNFP41002 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNFP41002 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCNFP41002 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNFP41002 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNFP41002 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNFP41002 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNFP41002 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNFP41002 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNFP41002 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNFP41002 AC009102.2-201ENST00000606772 1639 ntBASIC21.93■■□□□ 1.1
CCNFP41002 LINC01529-204ENST00000636474 1715 ntBASIC21.93■■□□□ 1.1
CCNFP41002 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms