Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.141e-5■□□□□ 8.6
EIF3DO15371 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-5■□□□□ 8.6
EIF3DO15371 AC126755.1-201ENST00000525846 6405 ntBASIC15.89■□□□□ 0.134e-9■□□□□ 8.6
EIF3DO15371 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.091e-5■□□□□ 8.6
EIF3DO15371 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.071e-5■□□□□ 8.6
EIF3DO15371 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.49■□□□□ 0.071e-5■□□□□ 8.6
EIF3DO15371 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.029e-8■□□□□ 8.6
EIF3DO15371 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.13■□□□□ 0.012e-10■□□□□ 8.6
EIF3DO15371 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.8□□□□□ -0.042e-7■□□□□ 8.6
EIF3DO15371 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-7■□□□□ 8.6
EIF3DO15371 TASP1-204ENST00000465381 993 ntTSL 514.75□□□□□ -0.051e-5■□□□□ 8.6
EIF3DO15371 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.052e-7■□□□□ 8.6
EIF3DO15371 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.64□□□□□ -0.079e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.079e-8■□□□□ 8.6
EIF3DO15371 SEC61B-202ENST00000481573 687 ntTSL 214.52□□□□□ -0.091e-5■□□□□ 8.6
EIF3DO15371 TYK2-221ENST00000592137 536 ntTSL 314.46□□□□□ -0.091e-5■□□□□ 8.6
EIF3DO15371 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.11e-5■□□□□ 8.6
EIF3DO15371 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.12e-7■□□□□ 8.6
EIF3DO15371 RNF213-215ENST00000573038 699 ntTSL 314.38□□□□□ -0.112e-7■□□□□ 8.6
EIF3DO15371 FUS-206ENST00000487509 4920 ntTSL 214.14□□□□□ -0.151e-35■□□□□ 8.6
EIF3DO15371 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.172e-10■□□□□ 8.6
EIF3DO15371 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.99□□□□□ -0.172e-10■□□□□ 8.6
EIF3DO15371 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.91□□□□□ -0.181e-5■□□□□ 8.6
EIF3DO15371 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.22e-7■□□□□ 8.6
EIF3DO15371 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.211e-5■□□□□ 8.6
EIF3DO15371 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.68□□□□□ -0.222e-7■□□□□ 8.6
EIF3DO15371 AL133352.1-205ENST00000533549 582 ntAPPRIS ALT2 TSL 413.58□□□□□ -0.242e-7■□□□□ 8.6
EIF3DO15371 MROH1-205ENST00000527552 5832 ntTSL 1 (best)13.28□□□□□ -0.281e-5■□□□□ 8.6
EIF3DO15371 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.311e-5■□□□□ 8.6
EIF3DO15371 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.331e-5■□□□□ 8.6
EIF3DO15371 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.86□□□□□ -0.352e-7■□□□□ 8.6
EIF3DO15371 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.352e-7■□□□□ 8.6
EIF3DO15371 FUS-205ENST00000487045 952 ntTSL 212.78□□□□□ -0.361e-35■□□□□ 8.6
EIF3DO15371 TYK2-215ENST00000530560 558 ntTSL 312.66□□□□□ -0.381e-5■□□□□ 8.6
EIF3DO15371 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC12.62□□□□□ -0.391e-5■□□□□ 8.6
EIF3DO15371 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.54□□□□□ -0.42e-10■□□□□ 8.6
EIF3DO15371 TRIO-206ENST00000504606 817 ntTSL 212.51□□□□□ -0.412e-7■□□□□ 8.6
EIF3DO15371 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC12.5□□□□□ -0.411e-5■□□□□ 8.6
EIF3DO15371 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-5■□□□□ 8.6
EIF3DO15371 LRP1-209ENST00000555941 499 ntTSL 312.34□□□□□ -0.432e-7■□□□□ 8.6
EIF3DO15371 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)12.33□□□□□ -0.442e-7■□□□□ 8.6
EIF3DO15371 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.451e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-224ENST00000592701 562 ntTSL 412.14□□□□□ -0.471e-5■□□□□ 8.6
EIF3DO15371 MROH1-208ENST00000532255 3905 ntTSL 211.69□□□□□ -0.541e-5■□□□□ 8.6
EIF3DO15371 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.542e-7■□□□□ 8.6
EIF3DO15371 PPT2-EGFL8-205ENST00000479001 944 ntTSL 511.66□□□□□ -0.542e-7■□□□□ 8.6
EIF3DO15371 BRD2-218ENST00000606059 565 ntTSL 211.66□□□□□ -0.541e-23■□□□□ 8.6
EIF3DO15371 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.551e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.581e-5■□□□□ 8.6
EIF3DO15371 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC11.14□□□□□ -0.631e-5■□□□□ 8.6
EIF3DO15371 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.631e-5■□□□□ 8.6
EIF3DO15371 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC11.11□□□□□ -0.639e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.649e-8■□□□□ 8.6
EIF3DO15371 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.651e-5■□□□□ 8.6
EIF3DO15371 AL133352.1-204ENST00000528174 538 ntAPPRIS ALT2 TSL 310.72□□□□□ -0.692e-7■□□□□ 8.6
EIF3DO15371 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.722e-7■□□□□ 8.6
EIF3DO15371 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.751e-5■□□□□ 8.6
EIF3DO15371 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.771e-5■□□□□ 8.6
EIF3DO15371 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)10.22□□□□□ -0.771e-5■□□□□ 8.6
EIF3DO15371 FRAS1-206ENST00000510944 2125 ntTSL 210.14□□□□□ -0.791e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-222ENST00000592408 561 ntTSL 410.1□□□□□ -0.791e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC10.08□□□□□ -0.81e-5■□□□□ 8.6
EIF3DO15371 TASP1-203ENST00000455532 1000 ntTSL 510.06□□□□□ -0.81e-5■□□□□ 8.6
EIF3DO15371 TASP1-205ENST00000476108 829 ntTSL 510.01□□□□□ -0.811e-5■□□□□ 8.6
EIF3DO15371 TASP1-207ENST00000483898 754 ntTSL 510.01□□□□□ -0.811e-5■□□□□ 8.6
EIF3DO15371 SMAD3-211ENST00000559460 568 ntTSL 49.95□□□□□ -0.821e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC9.84□□□□□ -0.831e-5■□□□□ 8.6
EIF3DO15371 TYK2-208ENST00000527481 628 ntTSL 39.78□□□□□ -0.841e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.859e-8■□□□□ 8.6
EIF3DO15371 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.862e-7■□□□□ 8.6
EIF3DO15371 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.882e-7■□□□□ 8.6
EIF3DO15371 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.921e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-205ENST00000558123 1934 ntTSL 59.14□□□□□ -0.959e-8■□□□□ 8.6
EIF3DO15371 NPM1-208ENST00000521672 597 ntTSL 59.03□□□□□ -0.968e-12■□□□□ 8.6
EIF3DO15371 NUSAP1-209ENST00000559659 529 ntTSL 29□□□□□ -0.979e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-206ENST00000558582 546 ntTSL 58.97□□□□□ -0.979e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-207ENST00000559046 580 ntTSL 58.94□□□□□ -0.989e-8■□□□□ 8.6
EIF3DO15371 EFTUD2-212ENST00000589211 584 ntTSL 48.91□□□□□ -0.981e-5■□□□□ 8.6
EIF3DO15371 RNF213-205ENST00000558116 3768 ntTSL 28.89□□□□□ -0.992e-7■□□□□ 8.6
EIF3DO15371 PON2-210ENST00000478801 555 ntTSL 48.88□□□□□ -0.991e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.019e-8■□□□□ 8.6
EIF3DO15371 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.022e-7■□□□□ 8.6
EIF3DO15371 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.042e-7■□□□□ 8.6
EIF3DO15371 LRP1-206ENST00000554118 418 ntTSL 28.51□□□□□ -1.059e-8■□□□□ 8.6
EIF3DO15371 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.091e-5■□□□□ 8.6
EIF3DO15371 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.18e-12■□□□□ 8.6
EIF3DO15371 CCNB1-206ENST00000508407 780 ntTSL 28.13□□□□□ -1.118e-13■□□□□ 8.6
EIF3DO15371 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.169e-8■□□□□ 8.6
EIF3DO15371 YWHAB-208ENST00000633979 689 ntTSL 37.73□□□□□ -1.172e-10■□□□□ 8.6
EIF3DO15371 EFTUD2-211ENST00000588374 524 ntTSL 37.4□□□□□ -1.221e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.239e-8■□□□□ 8.6
EIF3DO15371 MLF2-204ENST00000536249 570 ntTSL 27.05□□□□□ -1.289e-8■□□□□ 8.6
EIF3DO15371 SNHG14-225ENST00000626200 2073 ntTSL 1 (best)6.79□□□□□ -1.321e-5■□□□□ 8.6
EIF3DO15371 NPM1-205ENST00000518587 670 ntTSL 26.66□□□□□ -1.348e-12■□□□□ 8.6
EIF3DO15371 EFTUD2-225ENST00000593072 551 ntTSL 56.62□□□□□ -1.351e-5■□□□□ 8.6
EIF3DO15371 NPM1-211ENST00000523622 247 ntTSL 36.52□□□□□ -1.378e-12■□□□□ 8.6
EIF3DO15371 SMG1-204ENST00000561940 964 ntTSL 26.01□□□□□ -1.459e-8■□□□□ 8.6
EIF3DO15371 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.478e-12■□□□□ 8.6
EIF3DO15371 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.82□□□□□ -1.488e-12■□□□□ 8.6
EIF3DO15371 ANKRD17-206ENST00000514252 3259 ntTSL 25.29□□□□□ -1.561e-5■□□□□ 8.6
Retrieved 100 of 4,069 protein–RNA pairs in 258.3 ms