RNA–Protein interactions for RNA: ENST00000606059.1

BRD2-218, Transcript of bromodomain containing 2, humanhuman

TSL 2

Gene BRD2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-218ENST00000606059 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
BRD2-218ENST00000606059 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
BRD2-218ENST00000606059 ABCC9O60706 1549 aa23.56■■□□□ 1.36
BRD2-218ENST00000606059 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
BRD2-218ENST00000606059 NACADO15069 1562 aa22.47■■□□□ 1.19
BRD2-218ENST00000606059 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
BRD2-218ENST00000606059 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
BRD2-218ENST00000606059 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
BRD2-218ENST00000606059 MYO15BQ96JP2 1530 aa22.25■■□□□ 1.15
BRD2-218ENST00000606059 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
BRD2-218ENST00000606059 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
BRD2-218ENST00000606059 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
BRD2-218ENST00000606059 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
BRD2-218ENST00000606059 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
BRD2-218ENST00000606059 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
BRD2-218ENST00000606059 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
BRD2-218ENST00000606059 CC2D2AQ9P2K1 1620 aa21.36■■□□□ 1.01
BRD2-218ENST00000606059 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
BRD2-218ENST00000606059 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
BRD2-218ENST00000606059 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
BRD2-218ENST00000606059 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
BRD2-218ENST00000606059 NCAPD3P42695 1498 aa20.7■□□□□ 0.9
BRD2-218ENST00000606059 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
BRD2-218ENST00000606059 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
BRD2-218ENST00000606059 HMGXB3Q12766 1538 aa20.65■□□□□ 0.9
BRD2-218ENST00000606059 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
BRD2-218ENST00000606059 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
BRD2-218ENST00000606059 WIZO95785 1651 aa20.52■□□□□ 0.88
BRD2-218ENST00000606059 NESP48681 1621 aa20.38■□□□□ 0.85
BRD2-218ENST00000606059 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
BRD2-218ENST00000606059 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
BRD2-218ENST00000606059 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
BRD2-218ENST00000606059 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
BRD2-218ENST00000606059 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
BRD2-218ENST00000606059 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
BRD2-218ENST00000606059 CUX2O14529 1486 aa20.1■□□□□ 0.81
BRD2-218ENST00000606059 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
BRD2-218ENST00000606059 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
BRD2-218ENST00000606059 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
BRD2-218ENST00000606059 CFTRP13569 1480 aa19.96■□□□□ 0.79
BRD2-218ENST00000606059 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
BRD2-218ENST00000606059 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
BRD2-218ENST00000606059 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
BRD2-218ENST00000606059 WDR62O43379 1518 aa19.89■□□□□ 0.77
BRD2-218ENST00000606059 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
BRD2-218ENST00000606059 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
BRD2-218ENST00000606059 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.73
BRD2-218ENST00000606059 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
BRD2-218ENST00000606059 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
BRD2-218ENST00000606059 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
BRD2-218ENST00000606059 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
BRD2-218ENST00000606059 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
BRD2-218ENST00000606059 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
BRD2-218ENST00000606059 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
BRD2-218ENST00000606059 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
BRD2-218ENST00000606059 CUX1P39880 1505 aa19.42■□□□□ 0.7
BRD2-218ENST00000606059 POLA1P09884 1462 aaPredicted RBP19.41■□□□□ 0.7
BRD2-218ENST00000606059 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
BRD2-218ENST00000606059 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
BRD2-218ENST00000606059 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
BRD2-218ENST00000606059 CHD1O14646 1710 aa19.29■□□□□ 0.68
BRD2-218ENST00000606059 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.682e-9■■■■■ 37.7
BRD2-218ENST00000606059 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
BRD2-218ENST00000606059 SOGA1O94964 1423 aa19.25■□□□□ 0.67
BRD2-218ENST00000606059 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
BRD2-218ENST00000606059 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
BRD2-218ENST00000606059 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
BRD2-218ENST00000606059 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
BRD2-218ENST00000606059 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
BRD2-218ENST00000606059 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
BRD2-218ENST00000606059 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
BRD2-218ENST00000606059 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
BRD2-218ENST00000606059 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
BRD2-218ENST00000606059 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.65
BRD2-218ENST00000606059 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.65
BRD2-218ENST00000606059 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.65
BRD2-218ENST00000606059 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
BRD2-218ENST00000606059 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
BRD2-218ENST00000606059 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
BRD2-218ENST00000606059 ARHGEF11O15085 1522 aa19■□□□□ 0.63
BRD2-218ENST00000606059 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
BRD2-218ENST00000606059 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
BRD2-218ENST00000606059 FBLN2P98095 1184 aa18.98■□□□□ 0.63
BRD2-218ENST00000606059 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
BRD2-218ENST00000606059 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
BRD2-218ENST00000606059 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
BRD2-218ENST00000606059 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
BRD2-218ENST00000606059 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
BRD2-218ENST00000606059 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
BRD2-218ENST00000606059 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
BRD2-218ENST00000606059 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
BRD2-218ENST00000606059 NUP160Q12769 1436 aa18.78■□□□□ 0.6
BRD2-218ENST00000606059 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
BRD2-218ENST00000606059 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
BRD2-218ENST00000606059 CUL7Q14999 1698 aa18.73■□□□□ 0.59
BRD2-218ENST00000606059 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
BRD2-218ENST00000606059 CYB5RLQ6IPT4 315 aa18.71■□□□□ 0.59
BRD2-218ENST00000606059 KIF27Q86VH2 1401 aa18.71■□□□□ 0.59
BRD2-218ENST00000606059 IGF1RP08069 1367 aa18.68■□□□□ 0.58
BRD2-218ENST00000606059 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms