RNA–Protein interactions for RNA: ENST00000344297.8

ATP7B-202, Transcript of ATPase copper transporting beta, humanhuman

TSL 5 BASIC

Gene ATP7B, Length 5,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-202ENST00000344297 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
ATP7B-202ENST00000344297 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
ATP7B-202ENST00000344297 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
ATP7B-202ENST00000344297 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
ATP7B-202ENST00000344297 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
ATP7B-202ENST00000344297 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
ATP7B-202ENST00000344297 APLP2Q06481 763 aa20.87■□□□□ 0.93
ATP7B-202ENST00000344297 ABCC9O60706 1549 aa20.62■□□□□ 0.89
ATP7B-202ENST00000344297 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
ATP7B-202ENST00000344297 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
ATP7B-202ENST00000344297 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
ATP7B-202ENST00000344297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
ATP7B-202ENST00000344297 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
ATP7B-202ENST00000344297 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
ATP7B-202ENST00000344297 MYT1LQ9UL68 1186 aa19.94■□□□□ 0.78
ATP7B-202ENST00000344297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
ATP7B-202ENST00000344297 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
ATP7B-202ENST00000344297 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
ATP7B-202ENST00000344297 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
ATP7B-202ENST00000344297 FBLN2P98095 1184 aa19.53■□□□□ 0.72
ATP7B-202ENST00000344297 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.72
ATP7B-202ENST00000344297 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.71
ATP7B-202ENST00000344297 SCRIBQ14160 1630 aa19.52■□□□□ 0.71
ATP7B-202ENST00000344297 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
ATP7B-202ENST00000344297 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
ATP7B-202ENST00000344297 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
ATP7B-202ENST00000344297 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
ATP7B-202ENST00000344297 ITGAEP38570 1179 aa19.28■□□□□ 0.68
ATP7B-202ENST00000344297 NACADO15069 1562 aa19.21■□□□□ 0.67
ATP7B-202ENST00000344297 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
ATP7B-202ENST00000344297 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
ATP7B-202ENST00000344297 ERICH6Q7L0X2 663 aa19.07■□□□□ 0.64
ATP7B-202ENST00000344297 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
ATP7B-202ENST00000344297 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
ATP7B-202ENST00000344297 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
ATP7B-202ENST00000344297 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
ATP7B-202ENST00000344297 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
ATP7B-202ENST00000344297 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
ATP7B-202ENST00000344297 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
ATP7B-202ENST00000344297 TRIM26Q12899 539 aaPredicted RBP18.92■□□□□ 0.62
ATP7B-202ENST00000344297 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
ATP7B-202ENST00000344297 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
ATP7B-202ENST00000344297 BCANQ96GW7 911 aa18.85■□□□□ 0.61
ATP7B-202ENST00000344297 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
ATP7B-202ENST00000344297 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
ATP7B-202ENST00000344297 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
ATP7B-202ENST00000344297 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
ATP7B-202ENST00000344297 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
ATP7B-202ENST00000344297 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
ATP7B-202ENST00000344297 NEFLP07196 543 aa18.73■□□□□ 0.59
ATP7B-202ENST00000344297 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
ATP7B-202ENST00000344297 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
ATP7B-202ENST00000344297 MYT1Q01538 1121 aa18.57■□□□□ 0.56
ATP7B-202ENST00000344297 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
ATP7B-202ENST00000344297 CNGB1Q14028 1251 aaPredicted RBP18.56■□□□□ 0.56
ATP7B-202ENST00000344297 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
ATP7B-202ENST00000344297 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
ATP7B-202ENST00000344297 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
ATP7B-202ENST00000344297 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
ATP7B-202ENST00000344297 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
ATP7B-202ENST00000344297 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
ATP7B-202ENST00000344297 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
ATP7B-202ENST00000344297 PDS5BQ9NTI5 1447 aa18.36■□□□□ 0.53
ATP7B-202ENST00000344297 NEFMP07197 916 aa18.34■□□□□ 0.53
ATP7B-202ENST00000344297 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
ATP7B-202ENST00000344297 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
ATP7B-202ENST00000344297 KCNH8Q96L42 1107 aa18.33■□□□□ 0.53
ATP7B-202ENST00000344297 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
ATP7B-202ENST00000344297 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
ATP7B-202ENST00000344297 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
ATP7B-202ENST00000344297 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
ATP7B-202ENST00000344297 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
ATP7B-202ENST00000344297 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
ATP7B-202ENST00000344297 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
ATP7B-202ENST00000344297 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
ATP7B-202ENST00000344297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■□□□ 12.8
ATP7B-202ENST00000344297 EEA1Q15075 1411 aa18.25■□□□□ 0.51
ATP7B-202ENST00000344297 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
ATP7B-202ENST00000344297 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
ATP7B-202ENST00000344297 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
ATP7B-202ENST00000344297 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
ATP7B-202ENST00000344297 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
ATP7B-202ENST00000344297 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.49
ATP7B-202ENST00000344297 HRCP23327 699 aa18.13■□□□□ 0.49
ATP7B-202ENST00000344297 CLIP1P30622 1438 aa18.11■□□□□ 0.49
ATP7B-202ENST00000344297 ZBTB47Q9UFB7 747 aaPredicted RBP18.1■□□□□ 0.49
ATP7B-202ENST00000344297 ANP32CO43423 234 aa18.09■□□□□ 0.49
ATP7B-202ENST00000344297 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.48
ATP7B-202ENST00000344297 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
ATP7B-202ENST00000344297 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
ATP7B-202ENST00000344297 CUX2O14529 1486 aa18.06■□□□□ 0.48
ATP7B-202ENST00000344297 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
ATP7B-202ENST00000344297 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
ATP7B-202ENST00000344297 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
ATP7B-202ENST00000344297 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.47
ATP7B-202ENST00000344297 CFDP1Q9UEE9 299 aaPredicted RBP18.01■□□□□ 0.47
ATP7B-202ENST00000344297 SOGA1O94964 1423 aa18■□□□□ 0.47
ATP7B-202ENST00000344297 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
ATP7B-202ENST00000344297 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
ATP7B-202ENST00000344297 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms