RNA–Protein interactions for RNA: ENST00000400366.5

ATP7B-203, Transcript of ATPase copper transporting beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP7B, Length 6,304 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-203ENST00000400366 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
ATP7B-203ENST00000400366 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
ATP7B-203ENST00000400366 SUPT5HO00267 1087 aaKnown RBP20.5■□□□□ 0.87
ATP7B-203ENST00000400366 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
ATP7B-203ENST00000400366 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
ATP7B-203ENST00000400366 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
ATP7B-203ENST00000400366 APLP2Q06481 763 aa19.53■□□□□ 0.72
ATP7B-203ENST00000400366 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
ATP7B-203ENST00000400366 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
ATP7B-203ENST00000400366 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
ATP7B-203ENST00000400366 ATP1B4Q9UN42 357 aaPredicted RBP19.03■□□□□ 0.64
ATP7B-203ENST00000400366 ABCC9O60706 1549 aa18.91■□□□□ 0.62
ATP7B-203ENST00000400366 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
ATP7B-203ENST00000400366 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
ATP7B-203ENST00000400366 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
ATP7B-203ENST00000400366 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
ATP7B-203ENST00000400366 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
ATP7B-203ENST00000400366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
ATP7B-203ENST00000400366 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
ATP7B-203ENST00000400366 ZEB1P37275 1124 aaPredicted RBP18.45■□□□□ 0.54
ATP7B-203ENST00000400366 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
ATP7B-203ENST00000400366 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
ATP7B-203ENST00000400366 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
ATP7B-203ENST00000400366 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
ATP7B-203ENST00000400366 ITGAEP38570 1179 aa18.18■□□□□ 0.5
ATP7B-203ENST00000400366 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
ATP7B-203ENST00000400366 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
ATP7B-203ENST00000400366 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.49
ATP7B-203ENST00000400366 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
ATP7B-203ENST00000400366 FBLN2P98095 1184 aa17.98■□□□□ 0.47
ATP7B-203ENST00000400366 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
ATP7B-203ENST00000400366 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
ATP7B-203ENST00000400366 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
ATP7B-203ENST00000400366 NEFLP07196 543 aa17.9■□□□□ 0.46
ATP7B-203ENST00000400366 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
ATP7B-203ENST00000400366 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
ATP7B-203ENST00000400366 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
ATP7B-203ENST00000400366 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
ATP7B-203ENST00000400366 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
ATP7B-203ENST00000400366 NACADO15069 1562 aa17.66■□□□□ 0.42
ATP7B-203ENST00000400366 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
ATP7B-203ENST00000400366 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
ATP7B-203ENST00000400366 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
ATP7B-203ENST00000400366 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
ATP7B-203ENST00000400366 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
ATP7B-203ENST00000400366 HRCP23327 699 aa17.51■□□□□ 0.39
ATP7B-203ENST00000400366 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
ATP7B-203ENST00000400366 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
ATP7B-203ENST00000400366 BCANQ96GW7 911 aa17.45■□□□□ 0.38
ATP7B-203ENST00000400366 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
ATP7B-203ENST00000400366 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
ATP7B-203ENST00000400366 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
ATP7B-203ENST00000400366 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
ATP7B-203ENST00000400366 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
ATP7B-203ENST00000400366 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
ATP7B-203ENST00000400366 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
ATP7B-203ENST00000400366 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
ATP7B-203ENST00000400366 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
ATP7B-203ENST00000400366 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
ATP7B-203ENST00000400366 ANP32CO43423 234 aa17.18■□□□□ 0.34
ATP7B-203ENST00000400366 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
ATP7B-203ENST00000400366 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
ATP7B-203ENST00000400366 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
ATP7B-203ENST00000400366 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
ATP7B-203ENST00000400366 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
ATP7B-203ENST00000400366 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
ATP7B-203ENST00000400366 NEFMP07197 916 aa17.11■□□□□ 0.33
ATP7B-203ENST00000400366 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
ATP7B-203ENST00000400366 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
ATP7B-203ENST00000400366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■□□□ 12.8
ATP7B-203ENST00000400366 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
ATP7B-203ENST00000400366 EEA1Q15075 1411 aa17.02■□□□□ 0.32
ATP7B-203ENST00000400366 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
ATP7B-203ENST00000400366 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
ATP7B-203ENST00000400366 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.31
ATP7B-203ENST00000400366 CLIP1P30622 1438 aa17.01■□□□□ 0.31
ATP7B-203ENST00000400366 KIF27Q86VH2 1401 aa17■□□□□ 0.31
ATP7B-203ENST00000400366 TSPY4P0CV99 314 aa17■□□□□ 0.31
ATP7B-203ENST00000400366 TSPY10P0CW01 314 aa17■□□□□ 0.31
ATP7B-203ENST00000400366 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
ATP7B-203ENST00000400366 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
ATP7B-203ENST00000400366 KCNH8Q96L42 1107 aa16.96■□□□□ 0.3
ATP7B-203ENST00000400366 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
ATP7B-203ENST00000400366 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
ATP7B-203ENST00000400366 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
ATP7B-203ENST00000400366 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
ATP7B-203ENST00000400366 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
ATP7B-203ENST00000400366 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
ATP7B-203ENST00000400366 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
ATP7B-203ENST00000400366 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
ATP7B-203ENST00000400366 MYT1Q01538 1121 aa16.79■□□□□ 0.28
ATP7B-203ENST00000400366 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
ATP7B-203ENST00000400366 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
ATP7B-203ENST00000400366 CUX2O14529 1486 aa16.78■□□□□ 0.28
ATP7B-203ENST00000400366 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
ATP7B-203ENST00000400366 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
ATP7B-203ENST00000400366 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
ATP7B-203ENST00000400366 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
ATP7B-203ENST00000400366 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
ATP7B-203ENST00000400366 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms