RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
SEC61B-202ENST00000481573 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
SEC61B-202ENST00000481573 ABCC9O60706 1549 aa26.78■■□□□ 1.88
SEC61B-202ENST00000481573 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
SEC61B-202ENST00000481573 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
SEC61B-202ENST00000481573 NACADO15069 1562 aa26.04■■□□□ 1.76
SEC61B-202ENST00000481573 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
SEC61B-202ENST00000481573 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
SEC61B-202ENST00000481573 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
SEC61B-202ENST00000481573 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
SEC61B-202ENST00000481573 UNC13AQ9UPW8 1703 aa25.62■■□□□ 1.69
SEC61B-202ENST00000481573 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
SEC61B-202ENST00000481573 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
SEC61B-202ENST00000481573 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
SEC61B-202ENST00000481573 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
SEC61B-202ENST00000481573 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
SEC61B-202ENST00000481573 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
SEC61B-202ENST00000481573 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
SEC61B-202ENST00000481573 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
SEC61B-202ENST00000481573 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
SEC61B-202ENST00000481573 DNAJC5Q9H3Z4 198 aa24.37■■□□□ 1.49
SEC61B-202ENST00000481573 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
SEC61B-202ENST00000481573 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
SEC61B-202ENST00000481573 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
SEC61B-202ENST00000481573 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
SEC61B-202ENST00000481573 WIZO95785 1651 aa24.15■■□□□ 1.46
SEC61B-202ENST00000481573 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
SEC61B-202ENST00000481573 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
SEC61B-202ENST00000481573 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
SEC61B-202ENST00000481573 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
SEC61B-202ENST00000481573 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
SEC61B-202ENST00000481573 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
SEC61B-202ENST00000481573 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
SEC61B-202ENST00000481573 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
SEC61B-202ENST00000481573 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
SEC61B-202ENST00000481573 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
SEC61B-202ENST00000481573 NESP48681 1621 aa23.35■■□□□ 1.33
SEC61B-202ENST00000481573 LAMC3Q9Y6N6 1575 aa23.33■■□□□ 1.33
SEC61B-202ENST00000481573 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
SEC61B-202ENST00000481573 CFTRP13569 1480 aa23.28■■□□□ 1.32
SEC61B-202ENST00000481573 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
SEC61B-202ENST00000481573 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
SEC61B-202ENST00000481573 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
SEC61B-202ENST00000481573 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
SEC61B-202ENST00000481573 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
SEC61B-202ENST00000481573 CUX2O14529 1486 aa22.96■■□□□ 1.27
SEC61B-202ENST00000481573 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
SEC61B-202ENST00000481573 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
SEC61B-202ENST00000481573 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
SEC61B-202ENST00000481573 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
SEC61B-202ENST00000481573 WDR62O43379 1518 aa22.82■■□□□ 1.24
SEC61B-202ENST00000481573 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
SEC61B-202ENST00000481573 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
SEC61B-202ENST00000481573 CUX1P39880 1505 aa22.8■■□□□ 1.24
SEC61B-202ENST00000481573 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
SEC61B-202ENST00000481573 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
SEC61B-202ENST00000481573 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
SEC61B-202ENST00000481573 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
SEC61B-202ENST00000481573 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
SEC61B-202ENST00000481573 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
SEC61B-202ENST00000481573 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
SEC61B-202ENST00000481573 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
SEC61B-202ENST00000481573 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
SEC61B-202ENST00000481573 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
SEC61B-202ENST00000481573 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
SEC61B-202ENST00000481573 SOGA1O94964 1423 aa22.45■■□□□ 1.18
SEC61B-202ENST00000481573 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
SEC61B-202ENST00000481573 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
SEC61B-202ENST00000481573 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
SEC61B-202ENST00000481573 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
SEC61B-202ENST00000481573 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SEC61B-202ENST00000481573 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
SEC61B-202ENST00000481573 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
SEC61B-202ENST00000481573 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
SEC61B-202ENST00000481573 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
SEC61B-202ENST00000481573 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
SEC61B-202ENST00000481573 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
SEC61B-202ENST00000481573 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
SEC61B-202ENST00000481573 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
SEC61B-202ENST00000481573 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
SEC61B-202ENST00000481573 CUL7Q14999 1698 aa22.1■■□□□ 1.13
SEC61B-202ENST00000481573 CHD1O14646 1710 aa22.08■■□□□ 1.12
SEC61B-202ENST00000481573 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
SEC61B-202ENST00000481573 EEA1Q15075 1411 aa22.06■■□□□ 1.12
SEC61B-202ENST00000481573 IGF1RP08069 1367 aa22.06■■□□□ 1.12
SEC61B-202ENST00000481573 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
SEC61B-202ENST00000481573 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
SEC61B-202ENST00000481573 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
SEC61B-202ENST00000481573 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
SEC61B-202ENST00000481573 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
SEC61B-202ENST00000481573 KIF21BO75037 1637 aa21.93■■□□□ 1.1
SEC61B-202ENST00000481573 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
SEC61B-202ENST00000481573 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
SEC61B-202ENST00000481573 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
SEC61B-202ENST00000481573 CEP170Q5SW79 1584 aa21.84■■□□□ 1.09
SEC61B-202ENST00000481573 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
SEC61B-202ENST00000481573 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
SEC61B-202ENST00000481573 FBLN2P98095 1184 aa21.81■■□□□ 1.08
SEC61B-202ENST00000481573 NUP160Q12769 1436 aa21.79■■□□□ 1.08
SEC61B-202ENST00000481573 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms