RNA–Protein interactions for RNA: ENST00000573038.1

RNF213-215, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-215ENST00000573038 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
RNF213-215ENST00000573038 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
RNF213-215ENST00000573038 ABCC9O60706 1549 aa29.13■■■□□ 2.25
RNF213-215ENST00000573038 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
RNF213-215ENST00000573038 NACADO15069 1562 aa27.83■■■□□ 2.05
RNF213-215ENST00000573038 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
RNF213-215ENST00000573038 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
RNF213-215ENST00000573038 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
RNF213-215ENST00000573038 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.99
RNF213-215ENST00000573038 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
RNF213-215ENST00000573038 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
RNF213-215ENST00000573038 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
RNF213-215ENST00000573038 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
RNF213-215ENST00000573038 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
RNF213-215ENST00000573038 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
RNF213-215ENST00000573038 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
RNF213-215ENST00000573038 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
RNF213-215ENST00000573038 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
RNF213-215ENST00000573038 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
RNF213-215ENST00000573038 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
RNF213-215ENST00000573038 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
RNF213-215ENST00000573038 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
RNF213-215ENST00000573038 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
RNF213-215ENST00000573038 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
RNF213-215ENST00000573038 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
RNF213-215ENST00000573038 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
RNF213-215ENST00000573038 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
RNF213-215ENST00000573038 WIZO95785 1651 aa25.23■■□□□ 1.63
RNF213-215ENST00000573038 NESP48681 1621 aa25.15■■□□□ 1.62
RNF213-215ENST00000573038 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
RNF213-215ENST00000573038 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
RNF213-215ENST00000573038 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
RNF213-215ENST00000573038 CUX2O14529 1486 aa25■■□□□ 1.59
RNF213-215ENST00000573038 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
RNF213-215ENST00000573038 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
RNF213-215ENST00000573038 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
RNF213-215ENST00000573038 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
RNF213-215ENST00000573038 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
RNF213-215ENST00000573038 CFTRP13569 1480 aa24.68■■□□□ 1.54
RNF213-215ENST00000573038 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
RNF213-215ENST00000573038 MRC2Q9UBG0 1479 aa24.63■■□□□ 1.53
RNF213-215ENST00000573038 WDR62O43379 1518 aa24.6■■□□□ 1.53
RNF213-215ENST00000573038 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
RNF213-215ENST00000573038 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
RNF213-215ENST00000573038 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
RNF213-215ENST00000573038 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
RNF213-215ENST00000573038 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
RNF213-215ENST00000573038 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
RNF213-215ENST00000573038 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
RNF213-215ENST00000573038 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
RNF213-215ENST00000573038 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
RNF213-215ENST00000573038 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
RNF213-215ENST00000573038 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
RNF213-215ENST00000573038 TARBP1Q13395 1621 aaKnown RBP24.01■■□□□ 1.43
RNF213-215ENST00000573038 EIF4G3O43432 1585 aaKnown RBP23.97■■□□□ 1.43
RNF213-215ENST00000573038 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
RNF213-215ENST00000573038 CUX1P39880 1505 aa23.9■■□□□ 1.42
RNF213-215ENST00000573038 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
RNF213-215ENST00000573038 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
RNF213-215ENST00000573038 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
RNF213-215ENST00000573038 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.43e-9■■■□□ 15.5
RNF213-215ENST00000573038 SOGA1O94964 1423 aa23.82■■□□□ 1.4
RNF213-215ENST00000573038 CHD1O14646 1710 aa23.79■■□□□ 1.4
RNF213-215ENST00000573038 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
RNF213-215ENST00000573038 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
RNF213-215ENST00000573038 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
RNF213-215ENST00000573038 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
RNF213-215ENST00000573038 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
RNF213-215ENST00000573038 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
RNF213-215ENST00000573038 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
RNF213-215ENST00000573038 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
RNF213-215ENST00000573038 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
RNF213-215ENST00000573038 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
RNF213-215ENST00000573038 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
RNF213-215ENST00000573038 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
RNF213-215ENST00000573038 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
RNF213-215ENST00000573038 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
RNF213-215ENST00000573038 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
RNF213-215ENST00000573038 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
RNF213-215ENST00000573038 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
RNF213-215ENST00000573038 ARHGEF11O15085 1522 aa23.53■■□□□ 1.36
RNF213-215ENST00000573038 FBLN2P98095 1184 aa23.52■■□□□ 1.36
RNF213-215ENST00000573038 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
RNF213-215ENST00000573038 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
RNF213-215ENST00000573038 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
RNF213-215ENST00000573038 ADAMTS12P58397 1594 aa23.37■■□□□ 1.33
RNF213-215ENST00000573038 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
RNF213-215ENST00000573038 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
RNF213-215ENST00000573038 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
RNF213-215ENST00000573038 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
RNF213-215ENST00000573038 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
RNF213-215ENST00000573038 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
RNF213-215ENST00000573038 NUP160Q12769 1436 aa23.21■■□□□ 1.31
RNF213-215ENST00000573038 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
RNF213-215ENST00000573038 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
RNF213-215ENST00000573038 CUL7Q14999 1698 aa23.1■■□□□ 1.29
RNF213-215ENST00000573038 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
RNF213-215ENST00000573038 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
RNF213-215ENST00000573038 IGF1RP08069 1367 aa23.05■■□□□ 1.28
RNF213-215ENST00000573038 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms