Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 SEC18YBR080C 2277 nt4.67□□□□□ -1.66
TY1B-HO13535 GPI10YGL142C 1851 nt4.66□□□□□ -1.66
TY1B-HO13535 PPH3YDR075W 927 nt4.66□□□□□ -1.66
TY1B-HO13535 CBT1YKL208W 816 nt4.66□□□□□ -1.66
TY1B-HO13535 RPS12YOR369C 432 nt4.66□□□□□ -1.66
TY1B-HO13535 YMR135W-AYMR135W-A 534 nt4.65□□□□□ -1.66
TY1B-HO13535 KCH1YJR054W 1494 nt4.65□□□□□ -1.66
TY1B-HO13535 NAM2YLR382C 2685 nt4.65□□□□□ -1.67
TY1B-HO13535 YAL004WYAL004W 648 nt4.65□□□□□ -1.67
TY1B-HO13535 GIS2YNL255C 462 nt4.65□□□□□ -1.67
TY1B-HO13535 RPN3YER021W 1572 nt4.65□□□□□ -1.67
TY1B-HO13535 NAB6YML117W 3405 nt4.64□□□□□ -1.67
TY1B-HO13535 STE6YKL209C 3873 nt4.64□□□□□ -1.67
TY1B-HO13535 NUP133YKR082W 3474 nt4.64□□□□□ -1.67
TY1B-HO13535 YLR257WYLR257W 966 nt4.64□□□□□ -1.67
TY1B-HO13535 RIM21YNL294C 1602 nt4.64□□□□□ -1.67
TY1B-HO13535 NNK1YKL171W 2787 nt4.64□□□□□ -1.67
TY1B-HO13535 YDL023CYDL023C 321 nt4.63□□□□□ -1.67
TY1B-HO13535 STV1YMR054W 2673 nt4.63□□□□□ -1.67
TY1B-HO13535 YER084WYER084W 387 nt4.63□□□□□ -1.67
TY1B-HO13535 CAX4YGR036C 720 nt4.63□□□□□ -1.67
TY1B-HO13535 GPI14YJR013W 1212 nt4.63□□□□□ -1.67
TY1B-HO13535 CDC40YDR364C 1368 nt4.62□□□□□ -1.67
TY1B-HO13535 GAS4YOL132W 1416 nt4.62□□□□□ -1.67
TY1B-HO13535 PRP28YDR243C 1767 nt4.62□□□□□ -1.67
TY1B-HO13535 YOL107WYOL107W 1029 nt4.61□□□□□ -1.67
TY1B-HO13535 RAD26YJR035W 3258 nt4.61□□□□□ -1.67
TY1B-HO13535 ROG1YGL144C 2058 nt4.61□□□□□ -1.67
TY1B-HO13535 YIL169CYIL169C 2988 nt4.61□□□□□ -1.67
TY1B-HO13535 BIO2YGR286C 1128 nt4.6□□□□□ -1.67
TY1B-HO13535 BMS1YPL217C 3552 nt4.6□□□□□ -1.67
TY1B-HO13535 PPZ1YML016C 2079 nt4.6□□□□□ -1.67
TY1B-HO13535 PAU23YLR037C 375 nt4.6□□□□□ -1.67
TY1B-HO13535 PNG1YPL096W 1092 nt4.6□□□□□ -1.67
TY1B-HO13535 NUP85YJR042W 2235 nt4.59□□□□□ -1.67
TY1B-HO13535 RDI1YDL135C 609 nt4.59□□□□□ -1.67
TY1B-HO13535 GUS1YGL245W 2127 nt4.59□□□□□ -1.67
TY1B-HO13535 YHR069C-AYHR069C-A 363 nt4.59□□□□□ -1.67
TY1B-HO13535 VTC4YJL012C 2166 nt4.59□□□□□ -1.67
TY1B-HO13535 PRP9YDL030W 1593 nt4.59□□□□□ -1.67
TY1B-HO13535 AFT1YGL071W 2073 nt4.59□□□□□ -1.68
TY1B-HO13535 DAN4YJR151C 3486 nt4.59□□□□□ -1.68
TY1B-HO13535 YPL276WYPL276W 438 nt4.58□□□□□ -1.68
TY1B-HO13535 DIB1YPR082C 432 nt4.58□□□□□ -1.68
TY1B-HO13535 GCN5YGR252W 1320 nt4.58□□□□□ -1.68
TY1B-HO13535 NIS1YNL078W 1224 nt4.58□□□□□ -1.68
TY1B-HO13535 YNL108CYNL108C 813 nt4.58□□□□□ -1.68
TY1B-HO13535 HEH2YDR458C 1992 nt4.57□□□□□ -1.68
TY1B-HO13535 YLR001CYLR001C 2589 nt4.57□□□□□ -1.68
TY1B-HO13535 ESF1YDR365C 1887 nt4.57□□□□□ -1.68
TY1B-HO13535 TAF1YGR274C 3201 nt4.57□□□□□ -1.68
TY1B-HO13535 ARO9YHR137W 1542 nt4.56□□□□□ -1.68
TY1B-HO13535 CDC16YKL022C 2523 nt4.56□□□□□ -1.68
TY1B-HO13535 YAL031W-AYAL031W-A 309 nt4.56□□□□□ -1.68
TY1B-HO13535 YPS6YIR039C 1614 nt4.56□□□□□ -1.68
TY1B-HO13535 YER134CYER134C 537 nt4.55□□□□□ -1.68
TY1B-HO13535 PEX18YHR160C 852 nt4.55□□□□□ -1.68
TY1B-HO13535 YML037CYML037C 1023 nt4.55□□□□□ -1.68
TY1B-HO13535 YPR136CYPR136C 513 nt4.55□□□□□ -1.68
TY1B-HO13535 YPK9YOR291W 4419 nt4.55□□□□□ -1.68
TY1B-HO13535 PDR3YBL005W 2931 nt4.55□□□□□ -1.68
TY1B-HO13535 XRN1YGL173C 4587 nt4.55□□□□□ -1.68
TY1B-HO13535 YDR526CYDR526C 471 nt4.55□□□□□ -1.68
TY1B-HO13535 YKL107WYKL107W 930 nt4.55□□□□□ -1.68
TY1B-HO13535 MSN1YOL116W 1149 nt4.55□□□□□ -1.68
TY1B-HO13535 SPT23YKL020C 3249 nt4.54□□□□□ -1.68
TY1B-HO13535 RPS21AYKR057W 264 nt4.54□□□□□ -1.68
TY1B-HO13535 ZDS1YMR273C 2748 nt4.54□□□□□ -1.68
TY1B-HO13535 GRE1YPL223C 507 nt4.53□□□□□ -1.68
TY1B-HO13535 TUL1YKL034W 2277 nt4.53□□□□□ -1.68
TY1B-HO13535 BLM10YFL007W 6432 nt4.53□□□□□ -1.68
TY1B-HO13535 SIR1YKR101W 1965 nt4.53□□□□□ -1.68
TY1B-HO13535 CCW14YLR390W-A 717 nt4.53□□□□□ -1.69
TY1B-HO13535 CBP3YPL215W 1008 nt4.53□□□□□ -1.69
TY1B-HO13535 PRX1YBL064C 786 nt4.52□□□□□ -1.69
TY1B-HO13535 CHA4YLR098C 1947 nt4.52□□□□□ -1.69
TY1B-HO13535 RPS11AYDR025W 471 nt4.51□□□□□ -1.69
TY1B-HO13535 ERP6YGL002W 651 nt4.51□□□□□ -1.69
TY1B-HO13535 YIL175WYIL175W 318 nt4.51□□□□□ -1.69
TY1B-HO13535 YJL222W-BYJL222W-B 138 nt4.51□□□□□ -1.69
TY1B-HO13535 PEX32YBR168W 1242 nt4.51□□□□□ -1.69
TY1B-HO13535 snR43snR43 209 nt4.51□□□□□ -1.69
TY1B-HO13535 YPL109CYPL109C 1974 nt4.51□□□□□ -1.69
TY1B-HO13535 ILS1YBL076C 3219 nt4.51□□□□□ -1.69
TY1B-HO13535 CDC14YFR028C 1656 nt4.51□□□□□ -1.69
TY1B-HO13535 WTM2YOR229W 1404 nt4.51□□□□□ -1.69
TY1B-HO13535 RGC1YPR115W 3252 nt4.5□□□□□ -1.69
TY1B-HO13535 YOR022CYOR022C 2148 nt4.5□□□□□ -1.69
TY1B-HO13535 LCL2YLR104W 396 nt4.5□□□□□ -1.69
TY1B-HO13535 TUM1YOR251C 915 nt4.5□□□□□ -1.69
TY1B-HO13535 SMC6YLR383W 3345 nt4.5□□□□□ -1.69
TY1B-HO13535 SPT6YGR116W 4356 nt4.49□□□□□ -1.69
TY1B-HO13535 VEL1YGL258W 621 nt4.49□□□□□ -1.69
TY1B-HO13535 RNR2YJL026W 1200 nt4.49□□□□□ -1.69
TY1B-HO13535 YLR297WYLR297W 390 nt4.49□□□□□ -1.69
TY1B-HO13535 PRS5YOL061W 1491 nt4.49□□□□□ -1.69
TY1B-HO13535 GPI18YBR004C 1302 nt4.49□□□□□ -1.69
TY1B-HO13535 TMA108YIL137C 2841 nt4.48□□□□□ -1.69
TY1B-HO13535 GUP1YGL084C 1683 nt4.48□□□□□ -1.69
TY1B-HO13535 FKH1YIL131C 1455 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 53.9 ms