Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 ESRRAP2-201ENST00000418437 1549 ntBASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 GUSBP5-202ENST00000510805 1989 ntBASIC15.84■□□□□ 0.13
TRGV1A0A0A0MS02 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRGV1A0A0A0MS02 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRGV1A0A0A0MS02 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 AC099791.2-201ENST00000605725 427 ntBASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRGV1A0A0A0MS02 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRGV1A0A0A0MS02 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 LINC01960-201ENST00000563759 1884 ntBASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRGV1A0A0A0MS02 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms