Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 IRS3P-201ENST00000223076 1006 ntBASIC23.17■■□□□ 1.3
SMOQ99835 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.17■■□□□ 1.3
SMOQ99835 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.17■■□□□ 1.3
SMOQ99835 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.17■■□□□ 1.3
SMOQ99835 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.17■■□□□ 1.3
SMOQ99835 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.17■■□□□ 1.3
SMOQ99835 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.17■■□□□ 1.3
SMOQ99835 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMOQ99835 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
SMOQ99835 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.16■■□□□ 1.3
SMOQ99835 MIR935-201ENST00000401179 91 ntBASIC23.16■■□□□ 1.3
SMOQ99835 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.16■■□□□ 1.3
SMOQ99835 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.16■■□□□ 1.3
SMOQ99835 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.16■■□□□ 1.3
SMOQ99835 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.16■■□□□ 1.3
SMOQ99835 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMOQ99835 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMOQ99835 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMOQ99835 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
SMOQ99835 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
SMOQ99835 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMOQ99835 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMOQ99835 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SMOQ99835 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMOQ99835 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMOQ99835 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMOQ99835 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMOQ99835 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.14■■□□□ 1.3
SMOQ99835 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.14■■□□□ 1.29
SMOQ99835 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.14■■□□□ 1.29
SMOQ99835 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.14■■□□□ 1.29
SMOQ99835 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.14■■□□□ 1.29
SMOQ99835 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SMOQ99835 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.14■■□□□ 1.29
SMOQ99835 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SMOQ99835 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMOQ99835 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMOQ99835 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMOQ99835 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SMOQ99835 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SMOQ99835 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMOQ99835 AC068587.7-201ENST00000641602 218 ntBASIC23.13■■□□□ 1.29
SMOQ99835 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.13■■□□□ 1.29
SMOQ99835 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
SMOQ99835 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
SMOQ99835 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMOQ99835 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMOQ99835 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMOQ99835 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMOQ99835 MIR572-201ENST00000384983 95 ntBASIC23.12■■□□□ 1.29
SMOQ99835 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMOQ99835 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMOQ99835 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.12■■□□□ 1.29
SMOQ99835 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMOQ99835 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SMOQ99835 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.12■■□□□ 1.29
SMOQ99835 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.11■■□□□ 1.29
SMOQ99835 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.11■■□□□ 1.29
SMOQ99835 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.11■■□□□ 1.29
SMOQ99835 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SMOQ99835 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
SMOQ99835 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMOQ99835 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.1■■□□□ 1.29
SMOQ99835 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMOQ99835 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.1■■□□□ 1.29
SMOQ99835 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.1■■□□□ 1.29
SMOQ99835 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMOQ99835 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.1■■□□□ 1.29
SMOQ99835 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.1■■□□□ 1.29
SMOQ99835 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMOQ99835 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SMOQ99835 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.1■■□□□ 1.29
SMOQ99835 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.09■■□□□ 1.29
SMOQ99835 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMOQ99835 C9orf163-202ENST00000624034 2573 ntBASIC23.09■■□□□ 1.29
SMOQ99835 LINC01960-201ENST00000563759 1884 ntBASIC23.09■■□□□ 1.29
SMOQ99835 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
SMOQ99835 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMOQ99835 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMOQ99835 AC010141.3-201ENST00000456659 717 ntBASIC23.09■■□□□ 1.29
SMOQ99835 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.09■■□□□ 1.29
SMOQ99835 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMOQ99835 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms