Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AP003733.4-201ENST00000623785 1697 ntBASIC31.06■■■□□ 2.56
XRN1Q8IZH2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
XRN1Q8IZH2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 AC068587.7-201ENST00000641602 218 ntBASIC31.05■■■□□ 2.56
XRN1Q8IZH2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
XRN1Q8IZH2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.04■■■□□ 2.56
XRN1Q8IZH2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 KRT18P6-201ENST00000555540 1265 ntBASIC31.03■■■□□ 2.56
XRN1Q8IZH2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.03■■■□□ 2.56
XRN1Q8IZH2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.02■■■□□ 2.56
XRN1Q8IZH2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.02■■■□□ 2.56
XRN1Q8IZH2 AC079140.4-201ENST00000507448 529 ntBASIC31.02■■■□□ 2.56
XRN1Q8IZH2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
XRN1Q8IZH2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
XRN1Q8IZH2 TSPY6P-201ENST00000448518 926 ntBASIC31.01■■■□□ 2.56
XRN1Q8IZH2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.01■■■□□ 2.56
XRN1Q8IZH2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
XRN1Q8IZH2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.01■■■□□ 2.56
XRN1Q8IZH2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 AC004687.1-201ENST00000579003 1625 ntBASIC31.01■■■□□ 2.55
XRN1Q8IZH2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 AC098934.4-201ENST00000564127 592 ntBASIC31.01■■■□□ 2.55
XRN1Q8IZH2 UBE2DNL-204ENST00000602536 740 ntBASIC31.01■■■□□ 2.55
XRN1Q8IZH2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.01■■■□□ 2.55
XRN1Q8IZH2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31■■■□□ 2.55
XRN1Q8IZH2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31■■■□□ 2.55
XRN1Q8IZH2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
XRN1Q8IZH2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31■■■□□ 2.55
XRN1Q8IZH2 TESC-206ENST00000541210 936 ntTSL 3 BASIC31■■■□□ 2.55
XRN1Q8IZH2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
XRN1Q8IZH2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
XRN1Q8IZH2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31■■■□□ 2.55
XRN1Q8IZH2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 TSPY20P-201ENST00000450910 630 ntBASIC30.99■■■□□ 2.55
XRN1Q8IZH2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 DUX4L16-201ENST00000555130 1264 ntBASIC30.99■■■□□ 2.55
XRN1Q8IZH2 AL121832.2-201ENST00000610979 668 ntBASIC30.99■■■□□ 2.55
XRN1Q8IZH2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 KRT87P-202ENST00000534226 1464 ntBASIC30.99■■■□□ 2.55
XRN1Q8IZH2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
XRN1Q8IZH2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.98■■■□□ 2.55
XRN1Q8IZH2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
XRN1Q8IZH2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
XRN1Q8IZH2 MDK-213ENST00000617138 635 ntTSL 2 BASIC30.97■■■□□ 2.55
XRN1Q8IZH2 AC087239.1-201ENST00000622671 572 ntBASIC30.97■■■□□ 2.55
XRN1Q8IZH2 AC079630.1-202ENST00000618127 1840 ntBASIC30.97■■■□□ 2.55
XRN1Q8IZH2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
XRN1Q8IZH2 AC022211.4-201ENST00000625094 2161 ntBASIC30.96■■■□□ 2.55
XRN1Q8IZH2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 AC010141.3-201ENST00000456659 717 ntBASIC30.96■■■□□ 2.55
XRN1Q8IZH2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
XRN1Q8IZH2 AC135731.1-201ENST00000569415 2548 ntBASIC30.96■■■□□ 2.55
XRN1Q8IZH2 AL138781.1-201ENST00000566567 1274 ntBASIC30.95■■■□□ 2.55
XRN1Q8IZH2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.95■■■□□ 2.55
XRN1Q8IZH2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.95■■■□□ 2.55
XRN1Q8IZH2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
XRN1Q8IZH2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
XRN1Q8IZH2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.95■■■□□ 2.55
XRN1Q8IZH2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms