Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.63■■□□□ 1.05
SCUBE1Q8IWY4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE1Q8IWY4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 TSPY9P-201ENST00000440215 945 ntBASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 TSPY11P-201ENST00000442607 1045 ntBASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
SCUBE1Q8IWY4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCUBE1Q8IWY4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.59■■□□□ 1.05
SCUBE1Q8IWY4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 MIR6722-201ENST00000617286 78 ntBASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.58■■□□□ 1.05
SCUBE1Q8IWY4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCUBE1Q8IWY4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCUBE1Q8IWY4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms