Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 LINC01960-201ENST00000563759 1884 ntBASIC22.82■■□□□ 1.24
RFX6Q8HWS3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.82■■□□□ 1.24
RFX6Q8HWS3 AC080038.3-201ENST00000623346 1952 ntBASIC22.81■■□□□ 1.24
RFX6Q8HWS3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFX6Q8HWS3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RFX6Q8HWS3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFX6Q8HWS3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
RFX6Q8HWS3 AC139530.1-201ENST00000575312 1977 ntBASIC22.78■■□□□ 1.24
RFX6Q8HWS3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 LINC00565-201ENST00000562710 2331 ntBASIC22.77■■□□□ 1.24
RFX6Q8HWS3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 MIR3621-201ENST00000580529 85 ntBASIC22.77■■□□□ 1.24
RFX6Q8HWS3 AC241377.3-202ENST00000626088 1088 ntBASIC22.77■■□□□ 1.24
RFX6Q8HWS3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 AC241585.3-202ENST00000628937 1088 ntBASIC22.77■■□□□ 1.24
RFX6Q8HWS3 AC245100.8-202ENST00000629247 1058 ntBASIC22.77■■□□□ 1.24
RFX6Q8HWS3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RFX6Q8HWS3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.76■■□□□ 1.23
RFX6Q8HWS3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 AC006455.2-201ENST00000429931 906 ntBASIC22.75■■□□□ 1.23
RFX6Q8HWS3 AL499627.2-201ENST00000606283 725 ntBASIC22.75■■□□□ 1.23
RFX6Q8HWS3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RFX6Q8HWS3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms