Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 PRR2YDL214C 2100 nt5.23□□□□□ -1.57
SSM4P40318 SPR28YDR218C 1272 nt5.23□□□□□ -1.57
SSM4P40318 FMP32YFL046W 624 nt5.23□□□□□ -1.57
SSM4P40318 SCL1YGL011C 759 nt5.23□□□□□ -1.57
SSM4P40318 YHL049CYHL049C 816 nt5.23□□□□□ -1.57
SSM4P40318 YJR112W-AYJR112W-A 330 nt5.23□□□□□ -1.57
SSM4P40318 OMA1YKR087C 1038 nt5.23□□□□□ -1.57
SSM4P40318 YBR134WYBR134W 402 nt5.23□□□□□ -1.57
SSM4P40318 OCT1YKL134C 2319 nt5.22□□□□□ -1.57
SSM4P40318 SNF3YDL194W 2655 nt5.22□□□□□ -1.57
SSM4P40318 TGL4YKR089C 2733 nt5.22□□□□□ -1.57
SSM4P40318 YTA7YGR270W 4140 nt5.22□□□□□ -1.57
SSM4P40318 CNL1YDR357C 369 nt5.22□□□□□ -1.57
SSM4P40318 YFL041W-AYFL041W-A 192 nt5.22□□□□□ -1.57
SSM4P40318 YHL045WYHL045W 348 nt5.22□□□□□ -1.57
SSM4P40318 TPP1YMR156C 717 nt5.22□□□□□ -1.57
SSM4P40318 MOH1YBL049W 417 nt5.22□□□□□ -1.57
SSM4P40318 RPS9BYBR189W 588 nt5.22□□□□□ -1.57
SSM4P40318 TDA1YMR291W 1761 nt5.21□□□□□ -1.58
SSM4P40318 VPS53YJL029C 2469 nt5.21□□□□□ -1.58
SSM4P40318 YPK9YOR291W 4419 nt5.21□□□□□ -1.58
SSM4P40318 PRP43YGL120C 2304 nt5.21□□□□□ -1.58
SSM4P40318 GRX6YDL010W 696 nt5.21□□□□□ -1.58
SSM4P40318 FAD1YDL045C 921 nt5.21□□□□□ -1.58
SSM4P40318 DOS2YDR068W 933 nt5.21□□□□□ -1.58
SSM4P40318 YGR079WYGR079W 1113 nt5.21□□□□□ -1.58
SSM4P40318 SAY1YGR263C 1275 nt5.21□□□□□ -1.58
SSM4P40318 BIO2YGR286C 1128 nt5.21□□□□□ -1.58
SSM4P40318 GMH1YKR030W 822 nt5.21□□□□□ -1.58
SSM4P40318 HRT1YOL133W 366 nt5.21□□□□□ -1.58
SSM4P40318 YOR020W-AYOR020W-A 273 nt5.21□□□□□ -1.58
SSM4P40318 VHS3YOR054C 2025 nt5.2□□□□□ -1.58
SSM4P40318 MSD1YPL104W 1977 nt5.2□□□□□ -1.58
SSM4P40318 PCA1YBR295W 3651 nt5.2□□□□□ -1.58
SSM4P40318 YER084WYER084W 387 nt5.2□□□□□ -1.58
SSM4P40318 ATP12YJL180C 978 nt5.2□□□□□ -1.58
SSM4P40318 MPD1YOR288C 957 nt5.2□□□□□ -1.58
SSM4P40318 HFD1YMR110C 1599 nt5.2□□□□□ -1.58
SSM4P40318 YDR098C-AYDR098C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YDR210C-CYDR210C-C 1323 nt5.19□□□□□ -1.58
SSM4P40318 YDR261C-CYDR261C-C 1323 nt5.19□□□□□ -1.58
SSM4P40318 YDR316W-AYDR316W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YDR365W-AYDR365W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YER137C-AYER137C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YER159C-AYER159C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YGR027W-AYGR027W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YGR038C-AYGR038C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YGR161C-CYGR161C-C 1323 nt5.19□□□□□ -1.58
SSM4P40318 YJR026WYJR026W 1323 nt5.19□□□□□ -1.58
SSM4P40318 YJR028WYJR028W 1323 nt5.19□□□□□ -1.58
SSM4P40318 YAR010CYAR010C 1323 nt5.19□□□□□ -1.58
SSM4P40318 YLR157C-AYLR157C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YLR227W-AYLR227W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YLR256W-AYLR256W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YML040WYML040W 1323 nt5.19□□□□□ -1.58
SSM4P40318 YML045W-AYML045W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YMR051CYMR051C 1323 nt5.19□□□□□ -1.58
SSM4P40318 YNL054W-AYNL054W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YOL103W-AYOL103W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YPL257W-AYPL257W-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YPR137C-AYPR137C-A 1323 nt5.19□□□□□ -1.58
SSM4P40318 YPR158C-CYPR158C-C 1323 nt5.19□□□□□ -1.58
SSM4P40318 MBP1YDL056W 2502 nt5.19□□□□□ -1.58
SSM4P40318 LEU1YGL009C 2340 nt5.19□□□□□ -1.58
SSM4P40318 DIP2YLR129W 2832 nt5.19□□□□□ -1.58
SSM4P40318 UBX5YDR330W 1503 nt5.19□□□□□ -1.58
SSM4P40318 ESF1YDR365C 1887 nt5.19□□□□□ -1.58
SSM4P40318 PRP9YDL030W 1593 nt5.19□□□□□ -1.58
SSM4P40318 YER133W-AYER133W-A 342 nt5.19□□□□□ -1.58
SSM4P40318 SFH5YJL145W 885 nt5.19□□□□□ -1.58
SSM4P40318 MBR1YKL093W 1020 nt5.19□□□□□ -1.58
SSM4P40318 SPC3YLR066W 555 nt5.19□□□□□ -1.58
SSM4P40318 TIS11YLR136C 858 nt5.19□□□□□ -1.58
SSM4P40318 CDA2YLR308W 939 nt5.19□□□□□ -1.58
SSM4P40318 TOM7YNL070W 183 nt5.19□□□□□ -1.58
SSM4P40318 LAP3YNL239W 1365 nt5.18□□□□□ -1.58
SSM4P40318 PRP28YDR243C 1767 nt5.18□□□□□ -1.58
SSM4P40318 GDE1YPL110C 3672 nt5.18□□□□□ -1.58
SSM4P40318 ECT1YGR007W 972 nt5.18□□□□□ -1.58
SSM4P40318 TDA5YLR426W 981 nt5.18□□□□□ -1.58
SSM4P40318 VHS2YIL135C 1311 nt5.18□□□□□ -1.58
SSM4P40318 PHO12YHR215W 1404 nt5.17□□□□□ -1.58
SSM4P40318 PHO11YAR071W 1404 nt5.17□□□□□ -1.58
SSM4P40318 RFT1YBL020W 1725 nt5.17□□□□□ -1.58
SSM4P40318 RPB7YDR404C 516 nt5.17□□□□□ -1.58
SSM4P40318 YLR412C-AYLR412C-A 207 nt5.17□□□□□ -1.58
SSM4P40318 MTH1YDR277C 1302 nt5.17□□□□□ -1.58
SSM4P40318 ATG2YNL242W 4779 nt5.16□□□□□ -1.58
SSM4P40318 RAD7YJR052W 1698 nt5.16□□□□□ -1.58
SSM4P40318 IRC6YFR043C 714 nt5.16□□□□□ -1.58
SSM4P40318 YKL071WYKL071W 771 nt5.16□□□□□ -1.58
SSM4P40318 YPL114WYPL114W 420 nt5.16□□□□□ -1.58
SSM4P40318 DER1YBR201W 636 nt5.16□□□□□ -1.58
SSM4P40318 PUS9YDL036C 1389 nt5.16□□□□□ -1.58
SSM4P40318 PPZ1YML016C 2079 nt5.16□□□□□ -1.58
SSM4P40318 RAD2YGR258C 3096 nt5.15□□□□□ -1.58
SSM4P40318 RKM2YDR198C 1440 nt5.15□□□□□ -1.59
SSM4P40318 AAD3YCR107W 1092 nt5.15□□□□□ -1.59
SSM4P40318 GRX4YER174C 735 nt5.15□□□□□ -1.59
SSM4P40318 ELO3YLR372W 1038 nt5.15□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 77.2 ms