Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 KRT18P24-201ENST00000344739 1156 ntBASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56-RWDD3S4R434 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM56-RWDD3S4R434 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 MIR4281-201ENST00000580852 62 ntBASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 U85056.1-201ENST00000616429 682 ntBASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56-RWDD3S4R434 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56-RWDD3S4R434 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 THA1P-201ENST00000590384 1145 ntBASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 PKD1P6-201ENST00000343738 4769 ntBASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56-RWDD3S4R434 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 AC139795.1-202ENST00000500444 432 ntBASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56-RWDD3S4R434 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 LINC01529-204ENST00000636474 1715 ntBASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56-RWDD3S4R434 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms