Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 AC135731.1-201ENST00000569415 2548 ntBASIC18.95■□□□□ 0.62
CSMD1Q96PZ7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD1Q96PZ7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 DUX4L4-201ENST00000566884 1269 ntBASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 AC105233.4-201ENST00000642045 216 ntBASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 SLC6A10P-202ENST00000431994 2058 ntBASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD1Q96PZ7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 FAM210CP-201ENST00000445714 574 ntBASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.92■□□□□ 0.62
CSMD1Q96PZ7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 AC005181.1-201ENST00000604782 1256 ntBASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.91■□□□□ 0.62
CSMD1Q96PZ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 AP006294.2-201ENST00000641667 209 ntBASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 AC010501.1-201ENST00000606270 1962 ntBASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms