Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 AC127496.7-201ENST00000625110 1798 ntBASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 AC006455.2-201ENST00000429931 906 ntBASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNAI3Q3KNW1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AL512631.2-201ENST00000604634 923 ntBASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AC099791.2-201ENST00000605725 427 ntBASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AC241377.3-202ENST00000626088 1088 ntBASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AC241585.3-202ENST00000628937 1088 ntBASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 AC245100.8-202ENST00000629247 1058 ntBASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.11■□□□□ 0.65
SNAI3Q3KNW1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 LINC01960-201ENST00000563759 1884 ntBASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 AL499627.2-201ENST00000606283 725 ntBASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNAI3Q3KNW1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 AC242852.2-201ENST00000615738 1807 ntBASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNAI3Q3KNW1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 AC080038.3-201ENST00000623346 1952 ntBASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 LINC00526-201ENST00000581067 1875 ntBASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SNAI3Q3KNW1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms