Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC241377.3-202ENST00000626088 1088 ntBASIC22.93■■□□□ 1.26
CDH6P55285 AC241585.3-202ENST00000628937 1088 ntBASIC22.93■■□□□ 1.26
CDH6P55285 AC245100.8-202ENST00000629247 1058 ntBASIC22.93■■□□□ 1.26
CDH6P55285 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH6P55285 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDH6P55285 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CDH6P55285 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CDH6P55285 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.92■■□□□ 1.26
CDH6P55285 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.92■■□□□ 1.26
CDH6P55285 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.92■■□□□ 1.26
CDH6P55285 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.92■■□□□ 1.26
CDH6P55285 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.92■■□□□ 1.26
CDH6P55285 AC079834.2-201ENST00000609776 1949 ntBASIC22.92■■□□□ 1.26
CDH6P55285 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CDH6P55285 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CDH6P55285 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDH6P55285 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.91■■□□□ 1.26
CDH6P55285 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH6P55285 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH6P55285 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.91■■□□□ 1.26
CDH6P55285 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CDH6P55285 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.91■■□□□ 1.26
CDH6P55285 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.91■■□□□ 1.26
CDH6P55285 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.91■■□□□ 1.26
CDH6P55285 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.91■■□□□ 1.26
CDH6P55285 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.91■■□□□ 1.26
CDH6P55285 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.91■■□□□ 1.26
CDH6P55285 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.91■■□□□ 1.26
CDH6P55285 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH6P55285 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDH6P55285 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CDH6P55285 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH6P55285 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.9■■□□□ 1.26
CDH6P55285 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDH6P55285 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.9■■□□□ 1.26
CDH6P55285 AL512631.2-201ENST00000604634 923 ntBASIC22.9■■□□□ 1.26
CDH6P55285 AC127496.7-201ENST00000625110 1798 ntBASIC22.9■■□□□ 1.26
CDH6P55285 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDH6P55285 AC087742.1-201ENST00000575880 1738 ntBASIC22.9■■□□□ 1.26
CDH6P55285 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
CDH6P55285 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDH6P55285 EP400NL-214ENST00000641289 2402 ntBASIC22.9■■□□□ 1.26
CDH6P55285 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CDH6P55285 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDH6P55285 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
CDH6P55285 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.89■■□□□ 1.25
CDH6P55285 AC006455.2-201ENST00000429931 906 ntBASIC22.89■■□□□ 1.25
CDH6P55285 AC099791.2-201ENST00000605725 427 ntBASIC22.89■■□□□ 1.25
CDH6P55285 AL499627.2-201ENST00000606283 725 ntBASIC22.89■■□□□ 1.25
CDH6P55285 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CDH6P55285 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH6P55285 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CDH6P55285 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CDH6P55285 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.88■■□□□ 1.25
CDH6P55285 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.88■■□□□ 1.25
CDH6P55285 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.88■■□□□ 1.25
CDH6P55285 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH6P55285 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH6P55285 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH6P55285 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.87■■□□□ 1.25
CDH6P55285 LINC01960-201ENST00000563759 1884 ntBASIC22.87■■□□□ 1.25
CDH6P55285 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDH6P55285 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH6P55285 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
CDH6P55285 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
CDH6P55285 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CDH6P55285 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH6P55285 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.86■■□□□ 1.25
CDH6P55285 SRD5A1P1-201ENST00000442297 786 ntBASIC22.86■■□□□ 1.25
CDH6P55285 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.86■■□□□ 1.25
CDH6P55285 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms