Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 CDC4YFL009W 2340 nt5.79□□□□□ -1.48
MSH3P25336 YMD8YML038C 1329 nt5.78□□□□□ -1.48
MSH3P25336 YGR125WYGR125W 3111 nt5.78□□□□□ -1.48
MSH3P25336 PRP43YGL120C 2304 nt5.78□□□□□ -1.48
MSH3P25336 PDE1YGL248W 1110 nt5.78□□□□□ -1.48
MSH3P25336 DAM1YGR113W 1032 nt5.78□□□□□ -1.48
MSH3P25336 EFG1YGR271C-A 702 nt5.78□□□□□ -1.48
MSH3P25336 SPS18YNL204C 903 nt5.78□□□□□ -1.48
MSH3P25336 SOL1YNR034W 966 nt5.78□□□□□ -1.48
MSH3P25336 PNG1YPL096W 1092 nt5.78□□□□□ -1.48
MSH3P25336 VMA13YPR036W 1437 nt5.78□□□□□ -1.48
MSH3P25336 TUP1YCR084C 2142 nt5.78□□□□□ -1.48
MSH3P25336 PRO2YOR323C 1371 nt5.78□□□□□ -1.48
MSH3P25336 YNR066CYNR066C 1311 nt5.77□□□□□ -1.49
MSH3P25336 AIR2YDL175C 1035 nt5.77□□□□□ -1.49
MSH3P25336 YER084WYER084W 387 nt5.77□□□□□ -1.49
MSH3P25336 YER085CYER085C 522 nt5.77□□□□□ -1.49
MSH3P25336 EMC4YGL231C 573 nt5.77□□□□□ -1.49
MSH3P25336 tR(ACG)Q2tR(ACG)Q2 74 nt5.77□□□□□ -1.49
MSH3P25336 AIM25YJR100C 984 nt5.77□□□□□ -1.49
MSH3P25336 YKL107WYKL107W 930 nt5.77□□□□□ -1.49
MSH3P25336 NYV1YLR093C 762 nt5.77□□□□□ -1.49
MSH3P25336 YMR085WYMR085W 1299 nt5.77□□□□□ -1.49
MSH3P25336 TRI1YMR233W 681 nt5.77□□□□□ -1.49
MSH3P25336 UAF30YOR295W 687 nt5.77□□□□□ -1.49
MSH3P25336 CBC2YPL178W 627 nt5.77□□□□□ -1.49
MSH3P25336 SRB6YBR253W 366 nt5.77□□□□□ -1.49
MSH3P25336 PAL1YDR348C 1500 nt5.77□□□□□ -1.49
MSH3P25336 SLT2YHR030C 1455 nt5.77□□□□□ -1.49
MSH3P25336 YDL109CYDL109C 1944 nt5.76□□□□□ -1.49
MSH3P25336 HOF1YMR032W 2010 nt5.76□□□□□ -1.49
MSH3P25336 YIL001WYIL001W 1542 nt5.76□□□□□ -1.49
MSH3P25336 PDS1YDR113C 1122 nt5.76□□□□□ -1.49
MSH3P25336 GIR2YDR152W 798 nt5.76□□□□□ -1.49
MSH3P25336 HIS6YIL020C 786 nt5.76□□□□□ -1.49
MSH3P25336 FIG1YBR040W 897 nt5.76□□□□□ -1.49
MSH3P25336 CUP9YPL177C 921 nt5.76□□□□□ -1.49
MSH3P25336 YBR126W-AYBR126W-A 207 nt5.76□□□□□ -1.49
MSH3P25336 RPN4YDL020C 1596 nt5.76□□□□□ -1.49
MSH3P25336 TDA7YNL176C 1911 nt5.76□□□□□ -1.49
MSH3P25336 GIP1YBR045C 1920 nt5.76□□□□□ -1.49
MSH3P25336 BI2Q0110 1272 nt5.75□□□□□ -1.49
MSH3P25336 PCL7YIL050W 858 nt5.75□□□□□ -1.49
MSH3P25336 YKL177WYKL177W 339 nt5.75□□□□□ -1.49
MSH3P25336 CPR3YML078W 549 nt5.75□□□□□ -1.49
MSH3P25336 YMR158C-AYMR158C-A 138 nt5.75□□□□□ -1.49
MSH3P25336 SUR1YPL057C 1149 nt5.75□□□□□ -1.49
MSH3P25336 YHR202WYHR202W 1809 nt5.75□□□□□ -1.49
MSH3P25336 CLF1YLR117C 2064 nt5.75□□□□□ -1.49
MSH3P25336 TIM54YJL054W 1437 nt5.74□□□□□ -1.49
MSH3P25336 UTP5YDR398W 1932 nt5.74□□□□□ -1.49
MSH3P25336 DON1YDR273W 1098 nt5.74□□□□□ -1.49
MSH3P25336 YDR391CYDR391C 699 nt5.74□□□□□ -1.49
MSH3P25336 SPT3YDR392W 1014 nt5.74□□□□□ -1.49
MSH3P25336 RPL12AYEL054C 498 nt5.74□□□□□ -1.49
MSH3P25336 YER133W-AYER133W-A 342 nt5.74□□□□□ -1.49
MSH3P25336 ISC10YER180C 804 nt5.74□□□□□ -1.49
MSH3P25336 YFR009W-AYFR009W-A 258 nt5.74□□□□□ -1.49
MSH3P25336 NPY1YGL067W 1155 nt5.74□□□□□ -1.49
MSH3P25336 SCW4YGR279C 1161 nt5.74□□□□□ -1.49
MSH3P25336 EFM4YIL064W 774 nt5.74□□□□□ -1.49
MSH3P25336 SEC14YMR079W 915 nt5.74□□□□□ -1.49
MSH3P25336 RPL21BYPL079W 483 nt5.74□□□□□ -1.49
MSH3P25336 RSA1YPL193W 1146 nt5.74□□□□□ -1.49
MSH3P25336 SHE3YBR130C 1278 nt5.74□□□□□ -1.49
MSH3P25336 TUL1YKL034W 2277 nt5.74□□□□□ -1.49
MSH3P25336 TDH3YGR192C 999 nt5.73□□□□□ -1.49
MSH3P25336 YHR175W-AYHR175W-A 150 nt5.73□□□□□ -1.49
MSH3P25336 YKL162CYKL162C 1209 nt5.73□□□□□ -1.49
MSH3P25336 YPL199CYPL199C 723 nt5.73□□□□□ -1.49
MSH3P25336 TAF8YML114C 1533 nt5.73□□□□□ -1.49
MSH3P25336 NOP58YOR310C 1536 nt5.73□□□□□ -1.49
MSH3P25336 CTS1YLR286C 1689 nt5.72□□□□□ -1.49
MSH3P25336 KTR7YIL085C 1554 nt5.72□□□□□ -1.49
MSH3P25336 CAF4YKR036C 1932 nt5.72□□□□□ -1.49
MSH3P25336 NUP116YMR047C 3342 nt5.72□□□□□ -1.49
MSH3P25336 PCA1YBR295W 3651 nt5.72□□□□□ -1.49
MSH3P25336 YPT32YGL210W 669 nt5.72□□□□□ -1.49
MSH3P25336 HLJ1YMR161W 675 nt5.72□□□□□ -1.49
MSH3P25336 YNL013CYNL013C 378 nt5.72□□□□□ -1.49
MSH3P25336 RPC34YNR003C 954 nt5.72□□□□□ -1.49
MSH3P25336 MIC60YKR016W 1623 nt5.72□□□□□ -1.49
MSH3P25336 NUD1YOR373W 2556 nt5.72□□□□□ -1.49
MSH3P25336 PMT5YDL093W 2232 nt5.72□□□□□ -1.49
MSH3P25336 UTR4YEL038W 684 nt5.71□□□□□ -1.5
MSH3P25336 MRF1YGL143C 1242 nt5.71□□□□□ -1.5
MSH3P25336 YGL204CYGL204C 306 nt5.71□□□□□ -1.5
MSH3P25336 YGR016WYGR016W 573 nt5.71□□□□□ -1.5
MSH3P25336 CAX4YGR036C 720 nt5.71□□□□□ -1.5
MSH3P25336 YHR127WYHR127W 732 nt5.71□□□□□ -1.5
MSH3P25336 PGU1YJR153W 1086 nt5.71□□□□□ -1.5
MSH3P25336 MRPL17YNL252C 846 nt5.71□□□□□ -1.5
MSH3P25336 PFK27YOL136C 1194 nt5.71□□□□□ -1.5
MSH3P25336 SER1YOR184W 1188 nt5.71□□□□□ -1.5
MSH3P25336 HES1YOR237W 1305 nt5.71□□□□□ -1.5
MSH3P25336 PUS1YPL212C 1635 nt5.7□□□□□ -1.5
MSH3P25336 SIF2YBR103W 1608 nt5.7□□□□□ -1.5
MSH3P25336 APM2YHL019C 1818 nt5.7□□□□□ -1.5
MSH3P25336 VHC1YBR235W 3363 nt5.7□□□□□ -1.5
MSH3P25336 YCR108CYCR108C 192 nt5.7□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 43.4 ms