RNA–Protein interactions for RNA: YML038C

YMD8, Transcript of Putative nucleotide sugar transporter, yeastyeast

Gene YMD8, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMD8YML038C MTC1P47018 478 aaKnown RBP13.19□□□□□ -0.3
YMD8YML038C DRS1P32892 752 aaKnown RBP12.87□□□□□ -0.35
YMD8YML038C FAP1P53971 965 aa11.72□□□□□ -0.53
YMD8YML038C DIP2Q12220 943 aaPredicted RBP11.09□□□□□ -0.63
YMD8YML038C PRY3P47033 881 aa10.99□□□□□ -0.65
YMD8YML038C BFR2Q06631 534 aaKnown RBP10.97□□□□□ -0.65
YMD8YML038C PRI1P10363 409 aa10.93□□□□□ -0.66
YMD8YML038C ISW2Q08773 1120 aa10.88□□□□□ -0.67
YMD8YML038C AAD16Q02895 342 aa10.86□□□□□ -0.67
YMD8YML038C AVT3P36062 692 aa10.79□□□□□ -0.68
YMD8YML038C RPG1P38249 964 aaKnown RBP10.72□□□□□ -0.69
YMD8YML038C RSE1Q04693 1361 aaKnown RBP10.6□□□□□ -0.71
YMD8YML038C TSR3Q12094 313 aaKnown RBP10.39□□□□□ -0.75
YMD8YML038C TFA1P36100 482 aa10.33□□□□□ -0.76
YMD8YML038C YCK3P39962 524 aa10.26□□□□□ -0.77
YMD8YML038C HAA1Q12753 694 aaKnown RBP10.26□□□□□ -0.77
YMD8YML038C RPL17AP05740 184 aaKnown RBP10.21□□□□□ -0.78
YMD8YML038C RPL17BP46990 184 aaKnown RBP10.21□□□□□ -0.78
YMD8YML038C REB1P21538 810 aa10.16□□□□□ -0.78
YMD8YML038C MRPL32P25348 183 aa9.98□□□□□ -0.81
YMD8YML038C SPT21P35209 758 aa9.73□□□□□ -0.85
YMD8YML038C RQC2Q12532 1038 aaKnown RBP9.65□□□□□ -0.86
YMD8YML038C RIM101P33400 625 aa9.55□□□□□ -0.88
YMD8YML038C YKR023WP36119 530 aaKnown RBP9.52□□□□□ -0.89
YMD8YML038C YGL015CP33199 130 aa9.51□□□□□ -0.89
YMD8YML038C CDC27P38042 758 aa9.48□□□□□ -0.89
YMD8YML038C TFC8Q12308 588 aa9.35□□□□□ -0.91
YMD8YML038C HOP09932 586 aa9.34□□□□□ -0.91
YMD8YML038C TAF7Q05021 590 aa9.32□□□□□ -0.92
YMD8YML038C DCD1P06773 312 aa9.3□□□□□ -0.92
YMD8YML038C OXP1P28273 1286 aa9.21□□□□□ -0.94
YMD8YML038C YIL055CP40523 627 aaKnown RBP9.2□□□□□ -0.94
YMD8YML038C MAP2P38174 421 aaKnown RBP9.18□□□□□ -0.94
YMD8YML038C UBP10P53874 792 aaPredicted RBP9.18□□□□□ -0.94
YMD8YML038C PTP3P40048 928 aa9.14□□□□□ -0.95
YMD8YML038C YAH1Q12184 172 aaKnown RBP9.07□□□□□ -0.96
YMD8YML038C BCH2P36122 765 aa9.05□□□□□ -0.96
YMD8YML038C SCY1P53009 804 aa9.05□□□□□ -0.96
YMD8YML038C RSM7P47150 247 aa9.01□□□□□ -0.97
YMD8YML038C SSP1P38871 571 aa8.98□□□□□ -0.97
YMD8YML038C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
YMD8YML038C SLX5P32828 619 aaKnown RBP8.91□□□□□ -0.98
YMD8YML038C BBC1P47068 1157 aa8.91□□□□□ -0.98
YMD8YML038C YLR271WQ06152 274 aa8.9□□□□□ -0.98
YMD8YML038C DMA1P38823 416 aa8.89□□□□□ -0.99
YMD8YML038C EPS1P40557 701 aa8.89□□□□□ -0.99
YMD8YML038C AI2P03876 854 aa8.87□□□□□ -0.99
YMD8YML038C BUD31P25337 157 aaPredicted RBP8.87□□□□□ -0.99
YMD8YML038C TIF4632P39936 914 aaKnown RBP8.84□□□□□ -0.99
YMD8YML038C BDF1P35817 686 aa8.82□□□□□ -1
YMD8YML038C TGL3P40308 642 aa8.75□□□□□ -1.01
YMD8YML038C MGA2P40578 1113 aa8.71□□□□□ -1.02
YMD8YML038C PSD2P53037 1138 aaKnown RBP8.7□□□□□ -1.02
YMD8YML038C INO80P53115 1489 aa8.69□□□□□ -1.02
YMD8YML038C MON2P48563 1636 aaPredicted RBP8.66□□□□□ -1.02
YMD8YML038C CST9Q06032 482 aa8.6□□□□□ -1.03
YMD8YML038C MRM1P25270 412 aa8.57□□□□□ -1.04
YMD8YML038C NSR1P27476 414 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
YMD8YML038C UBP9P39967 754 aa8.49□□□□□ -1.05
YMD8YML038C RTG3P38165 486 aa8.47□□□□□ -1.05
YMD8YML038C YAP5P40574 245 aa8.47□□□□□ -1.05
YMD8YML038C YOR238WQ08634 303 aa8.45□□□□□ -1.06
YMD8YML038C LEO1P38439 464 aa8.42□□□□□ -1.06
YMD8YML038C MST1P07236 462 aa8.38□□□□□ -1.07
YMD8YML038C YMR1P47147 688 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
YMD8YML038C SIS1P25294 352 aaKnown RBP8.35□□□□□ -1.07
YMD8YML038C VPS29P38759 282 aa8.34□□□□□ -1.07
YMD8YML038C RCR1P38212 213 aa8.32□□□□□ -1.08
YMD8YML038C GTT3P39996 337 aa8.29□□□□□ -1.08
YMD8YML038C YBL029C-AQ3E756 94 aa8.29□□□□□ -1.08
YMD8YML038C SWR1Q05471 1514 aa8.29□□□□□ -1.08
YMD8YML038C DBP1P24784 617 aaKnown RBP8.29□□□□□ -1.08
YMD8YML038C PIB1Q06651 286 aa8.29□□□□□ -1.08
YMD8YML038C DNA2P38859 1522 aa8.28□□□□□ -1.08
YMD8YML038C RAM2P29703 316 aa8.26□□□□□ -1.09
YMD8YML038C YFR006WP43590 535 aa8.25□□□□□ -1.09
YMD8YML038C STS1P38637 319 aa8.23□□□□□ -1.09
YMD8YML038C WSC3Q12215 556 aa8.23□□□□□ -1.09
YMD8YML038C TCB3Q03640 1545 aaKnown RBP8.22□□□□□ -1.09
YMD8YML038C MAK11P20484 414 aaKnown RBP8.21□□□□□ -1.1
YMD8YML038C VNX1P42839 908 aa8.17□□□□□ -1.1
YMD8YML038C TY1B-DR4Q07793 1604 aa8.16□□□□□ -1.1
YMD8YML038C VMA1P17255 1071 aaKnown RBP8.15□□□□□ -1.1
YMD8YML038C SPP1Q03012 353 aa8.15□□□□□ -1.1
YMD8YML038C KOG1P38873 1557 aa8.14□□□□□ -1.11
YMD8YML038C SGS1P35187 1447 aa8.14□□□□□ -1.11
YMD8YML038C MIF2P35201 549 aa8.11□□□□□ -1.11
YMD8YML038C MSB4Q12317 492 aa8.09□□□□□ -1.11
YMD8YML038C SAM3Q08986 587 aa8.08□□□□□ -1.12
YMD8YML038C COQ8P27697 501 aa8.07□□□□□ -1.12
YMD8YML038C TIF11P38912 153 aaKnown RBP8.06□□□□□ -1.12
YMD8YML038C YOL036WQ08206 761 aa8.06□□□□□ -1.12
YMD8YML038C EAP1P36041 632 aaKnown RBP8.05□□□□□ -1.12
YMD8YML038C LEU3P08638 886 aa8.04□□□□□ -1.12
YMD8YML038C SET4P42948 560 aa8.04□□□□□ -1.12
YMD8YML038C SAS10Q12136 610 aaPredicted RBP8.04□□□□□ -1.12
YMD8YML038C NOP53Q12080 455 aaKnown RBP8.03□□□□□ -1.12
YMD8YML038C GYP5Q12344 894 aa8.03□□□□□ -1.12
YMD8YML038C ABP1P15891 592 aaKnown RBP8.03□□□□□ -1.12
YMD8YML038C SET1P38827 1080 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms