Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SFTPBP07988 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.06■□□□□ 0.64
SFTPBP07988 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.06■□□□□ 0.64
SFTPBP07988 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.06■□□□□ 0.64
SFTPBP07988 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.05■□□□□ 0.64
SFTPBP07988 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SFTPBP07988 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.05■□□□□ 0.64
SFTPBP07988 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
SFTPBP07988 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.05■□□□□ 0.64
SFTPBP07988 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.05■□□□□ 0.64
SFTPBP07988 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.05■□□□□ 0.64
SFTPBP07988 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SFTPBP07988 MTDHP2-201ENST00000601468 714 ntBASIC19.05■□□□□ 0.64
SFTPBP07988 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SFTPBP07988 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SFTPBP07988 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SFTPBP07988 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.04■□□□□ 0.64
SFTPBP07988 AC010997.5-201ENST00000609182 354 ntBASIC19.04■□□□□ 0.64
SFTPBP07988 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SFTPBP07988 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 AL353803.4-201ENST00000565882 1934 ntBASIC19.03■□□□□ 0.64
SFTPBP07988 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SFTPBP07988 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.03■□□□□ 0.64
SFTPBP07988 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SFTPBP07988 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.02■□□□□ 0.64
SFTPBP07988 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.02■□□□□ 0.64
SFTPBP07988 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.02■□□□□ 0.64
SFTPBP07988 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SFTPBP07988 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SFTPBP07988 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SFTPBP07988 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SFTPBP07988 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.02■□□□□ 0.64
SFTPBP07988 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.02■□□□□ 0.64
SFTPBP07988 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SFTPBP07988 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SFTPBP07988 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SFTPBP07988 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SFTPBP07988 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SFTPBP07988 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SFTPBP07988 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.01■□□□□ 0.63
SFTPBP07988 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.01■□□□□ 0.63
SFTPBP07988 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.01■□□□□ 0.63
SFTPBP07988 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
SFTPBP07988 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SFTPBP07988 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SFTPBP07988 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SFTPBP07988 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19■□□□□ 0.63
SFTPBP07988 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19■□□□□ 0.63
SFTPBP07988 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SFTPBP07988 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SFTPBP07988 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SFTPBP07988 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SFTPBP07988 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.99■□□□□ 0.63
SFTPBP07988 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SFTPBP07988 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SFTPBP07988 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SFTPBP07988 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.99■□□□□ 0.63
SFTPBP07988 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms